Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024990

Experiment: Azelaic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Azelaic (C); anaerobic
5,427,631	-		TX73_024985	0.28	+0.4
5,427,734	+		TX73_024985	0.37	-0.3
5,427,745	-		TX73_024985	0.38	+0.8
5,427,868	+		TX73_024985	0.48	+1.0
5,427,881	+		TX73_024985	0.49	-0.1
5,427,903	+		TX73_024985	0.51	+1.0
5,427,906	-		TX73_024985	0.51	+0.2
5,428,174	-		TX73_024985	0.73	-1.0
5,428,191	-		TX73_024985	0.74	-0.2
5,428,193	+		TX73_024985	0.74	+0.8
5,428,243	+		TX73_024985	0.78	+0.3
5,428,251	-		TX73_024985	0.79	-0.4
5,428,251	-		TX73_024985	0.79	+0.5
5,428,258	+		TX73_024985	0.80	+0.6
5,428,271	-		TX73_024985	0.81	+0.2
5,428,287	-		TX73_024985	0.82	-2.2
5,428,318	+		TX73_024985	0.85	+0.3
5,428,353	-		TX73_024985	0.87	-0.3
5,428,380	+		TX73_024985	0.90	-0.2
5,428,431	-				+0.3
5,428,431	-				+0.2
5,428,450	-				+0.1
5,428,476	+				-0.4
5,428,478	+				+0.0
5,428,486	-				+0.3
5,428,517	+				+0.2
5,428,611	+				+1.4
5,428,618	-				-0.4
5,428,627	+				-0.8
5,428,637	+				+0.1
5,428,645	-				+0.0
5,428,645	-				+0.2
5,428,678	-				+0.1
5,428,684	+				+0.6
5,428,684	+				-0.0
5,428,740	+				+0.8
5,428,767	-		TX73_024990	0.12	+0.5
5,428,793	-		TX73_024990	0.14	-0.3
5,428,793	-		TX73_024990	0.14	+0.0
5,428,803	-		TX73_024990	0.15	+0.1
5,428,831	+		TX73_024990	0.17	+0.5
5,428,839	-		TX73_024990	0.18	-0.4
5,428,839	-		TX73_024990	0.18	+0.5
5,428,891	-		TX73_024990	0.22	-0.4
5,428,901	+		TX73_024990	0.23	+0.3
5,428,934	+		TX73_024990	0.26	+0.0
5,428,934	+		TX73_024990	0.26	-0.8
5,428,942	-		TX73_024990	0.26	+1.2
5,428,942	-		TX73_024990	0.26	+0.4
5,428,942	-		TX73_024990	0.26	-0.4
5,428,967	+		TX73_024990	0.28	+0.2
5,428,972	-		TX73_024990	0.29	+0.5
5,428,981	+		TX73_024990	0.29	+0.6
5,428,989	-		TX73_024990	0.30	-0.3
5,428,989	-		TX73_024990	0.30	+0.2
5,428,992	+		TX73_024990	0.30	-0.8
5,428,992	+		TX73_024990	0.30	-1.1
5,428,994	-		TX73_024990	0.30	+0.4
5,428,999	-		TX73_024990	0.31	+0.9
5,429,005	-		TX73_024990	0.31	+0.5
5,429,013	+		TX73_024990	0.32	+0.2
5,429,019	+		TX73_024990	0.33	-0.5
5,429,024	+		TX73_024990	0.33	-0.3
5,429,032	-		TX73_024990	0.34	+0.4
5,429,042	-		TX73_024990	0.34	+0.4
5,429,108	-		TX73_024990	0.40	-0.3
5,429,113	-		TX73_024990	0.40	-0.5
5,429,113	-		TX73_024990	0.40	-0.0
5,429,134	-		TX73_024990	0.42	-1.1
5,429,137	+		TX73_024990	0.42	-1.1
5,429,146	+		TX73_024990	0.43	+0.0
5,429,152	+		TX73_024990	0.43	-0.6
5,429,160	-		TX73_024990	0.44	+0.5
5,429,162	+		TX73_024990	0.44	-0.2
5,429,162	+		TX73_024990	0.44	-0.0
5,429,176	-		TX73_024990	0.45	+1.3
5,429,176	-		TX73_024990	0.45	+0.1
5,429,191	-		TX73_024990	0.47	-0.4
5,429,197	+		TX73_024990	0.47	-0.2
5,429,227	-		TX73_024990	0.49	+0.0
5,429,263	-		TX73_024990	0.52	+0.5
5,429,272	-		TX73_024990	0.53	+0.4
5,429,280	-		TX73_024990	0.54	+0.2
5,429,323	-		TX73_024990	0.57	+0.5
5,429,368	+		TX73_024990	0.61	+0.2
5,429,368	+		TX73_024990	0.61	+1.2
5,429,368	+		TX73_024990	0.61	+0.6
5,429,389	-		TX73_024990	0.63	+0.6
5,429,404	-		TX73_024990	0.64	-0.4
5,429,526	+		TX73_024990	0.74	-0.5
5,429,639	+		TX73_024990	0.83	+0.3
5,429,644	+		TX73_024990	0.83	+0.3
5,429,660	+		TX73_024990	0.85	-0.6
5,429,663	-		TX73_024990	0.85	-1.1
5,429,696	+		TX73_024990	0.88	-0.0
5,429,711	+		TX73_024990	0.89	+0.3
5,429,765	+				-0.1
5,429,791	-				-0.7
5,429,828	-				-1.3
5,429,850	-				-0.4
5,429,890	-				-0.1
5,429,902	+				-0.2
5,429,914	+				-0.1
5,429,915	+				+0.5
5,429,924	+				+0.4
5,429,943	+				-0.1
5,429,951	-				+0.6
5,429,970	+				-0.2
5,430,015	-				-0.9
5,430,015	-				-0.5
5,430,053	+				-0.3
5,430,083	+				-0.4
5,430,111	-				-1.0
5,430,119	-				-2.7
5,430,189	+				-0.2
5,430,218	+				-0.3
5,430,218	+				+0.4
5,430,218	+				-0.6
5,430,218	+				+0.5
5,430,218	+				-0.5
5,430,218	+				+0.2
5,430,226	-				+0.1
5,430,226	-				-0.1
5,430,231	-				-1.4
5,430,253	+		TX73_024995	0.11	-0.3
5,430,254	-		TX73_024995	0.11	-0.2
5,430,254	-		TX73_024995	0.11	+0.3
5,430,266	+		TX73_024995	0.13	-1.2
5,430,323	+		TX73_024995	0.22	-0.4
5,430,336	+		TX73_024995	0.24	-0.1
5,430,344	-		TX73_024995	0.25	+0.6
5,430,359	+		TX73_024995	0.28	-0.7
5,430,402	-		TX73_024995	0.34	-0.1
5,430,440	+		TX73_024995	0.40	+1.2
5,430,441	+		TX73_024995	0.40	-0.6
5,430,446	+		TX73_024995	0.41	+0.4
5,430,451	+		TX73_024995	0.42	-0.2
5,430,451	+		TX73_024995	0.42	+0.4
5,430,464	-		TX73_024995	0.44	-0.4
5,430,474	-		TX73_024995	0.45	-0.3
5,430,502	-		TX73_024995	0.49	+1.3
5,430,502	-		TX73_024995	0.49	+0.4
5,430,526	+		TX73_024995	0.53	-0.2
5,430,534	+		TX73_024995	0.54	-0.4
5,430,534	-		TX73_024995	0.54	-0.5
5,430,544	-		TX73_024995	0.56	-0.1
5,430,561	-		TX73_024995	0.58	+0.6
5,430,577	+		TX73_024995	0.61	-0.1
5,430,577	+		TX73_024995	0.61	+0.4
5,430,577	+		TX73_024995	0.61	-1.3
5,430,577	+		TX73_024995	0.61	+0.1
5,430,579	-		TX73_024995	0.61	-0.4
5,430,582	+		TX73_024995	0.62	-0.7
5,430,582	+		TX73_024995	0.62	-0.8
5,430,585	-		TX73_024995	0.62	-0.4
5,430,587	+		TX73_024995	0.62	+0.3
5,430,613	-		TX73_024995	0.66	+1.9
5,430,663	+		TX73_024995	0.74	-0.7
5,430,743	+		TX73_024995	0.86	-0.8
5,430,818	+				-0.2
5,430,823	+				-0.1
5,430,823	+				-0.4
5,430,826	-				+0.2
5,430,826	-				-0.3
5,430,834	-				+0.2
5,430,846	+				+0.7