Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014695

Experiment: Azelaic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Azelaic (C); anaerobic
3,214,081	-				+0.6
3,214,139	-				-0.1
3,214,139	-				-0.5
3,214,149	-				+0.0
3,214,170	+				-0.3
3,214,170	+				-0.4
3,214,180	+				-0.5
3,214,183	-				-0.5
3,214,185	-				+0.4
3,214,188	+				+0.3
3,214,189	-				-0.6
3,214,189	-				+0.1
3,214,190	-				-0.3
3,214,196	-				-2.1
3,214,224	-		TX73_014695	0.14	+0.1
3,214,224	-		TX73_014695	0.14	+0.9
3,214,229	-		TX73_014695	0.15	-0.5
3,214,234	+		TX73_014695	0.15	-0.1
3,214,234	-		TX73_014695	0.15	+0.4
3,214,239	-		TX73_014695	0.16	-0.9
3,214,265	+		TX73_014695	0.20	+0.3
3,214,265	+		TX73_014695	0.20	+0.6
3,214,265	+		TX73_014695	0.20	+1.1
3,214,265	+		TX73_014695	0.20	+0.2
3,214,273	-		TX73_014695	0.21	+0.4
3,214,273	-		TX73_014695	0.21	+0.0
3,214,273	-		TX73_014695	0.21	-0.5
3,214,273	-		TX73_014695	0.21	+0.6
3,214,273	-		TX73_014695	0.21	-0.7
3,214,273	-		TX73_014695	0.21	+1.1
3,214,278	-		TX73_014695	0.22	-0.5
3,214,284	-		TX73_014695	0.23	+1.1
3,214,289	-		TX73_014695	0.24	+0.1
3,214,310	-		TX73_014695	0.27	+0.2
3,214,310	-		TX73_014695	0.27	+0.0
3,214,312	+		TX73_014695	0.27	+1.8
3,214,312	+		TX73_014695	0.27	+1.6
3,214,312	+		TX73_014695	0.27	+0.6
3,214,313	+		TX73_014695	0.28	-0.4
3,214,313	+		TX73_014695	0.28	-0.8
3,214,313	+		TX73_014695	0.28	-0.8
3,214,313	+		TX73_014695	0.28	+0.2
3,214,313	+		TX73_014695	0.28	+0.2
3,214,320	-		TX73_014695	0.29	+1.1
3,214,321	-		TX73_014695	0.29	-1.2
3,214,321	-		TX73_014695	0.29	-0.5
3,214,321	-		TX73_014695	0.29	+1.4
3,214,321	-		TX73_014695	0.29	+1.6
3,214,329	-		TX73_014695	0.30	+1.6
3,214,334	-		TX73_014695	0.31	-0.5
3,214,342	+		TX73_014695	0.32	+1.0
3,214,359	+		TX73_014695	0.35	+0.1
3,214,367	-		TX73_014695	0.36	+0.6
3,214,409	+		TX73_014695	0.42	+1.1
3,214,409	+		TX73_014695	0.42	-0.0
3,214,432	-		TX73_014695	0.46	-0.7
3,214,449	+		TX73_014695	0.48	+0.3
3,214,457	-		TX73_014695	0.50	+0.0
3,214,457	-		TX73_014695	0.50	-0.5
3,214,459	+		TX73_014695	0.50	-0.4
3,214,464	+		TX73_014695	0.51	-0.4
3,214,467	-		TX73_014695	0.51	+0.1
3,214,467	-		TX73_014695	0.51	-1.0
3,214,474	-		TX73_014695	0.52	+1.1
3,214,474	-		TX73_014695	0.52	-0.8
3,214,490	+		TX73_014695	0.55	+0.4
3,214,493	+		TX73_014695	0.55	+0.6
3,214,494	-		TX73_014695	0.55	+0.6
3,214,498	-		TX73_014695	0.56	+0.2
3,214,506	-		TX73_014695	0.57	+0.6
3,214,506	-		TX73_014695	0.57	+0.2
3,214,541	+		TX73_014695	0.62	-0.6
3,214,553	-		TX73_014695	0.64	+0.1
3,214,553	-		TX73_014695	0.64	+1.0
3,214,577	-		TX73_014695	0.68	-0.9
3,214,577	-		TX73_014695	0.68	+0.1
3,214,589	+		TX73_014695	0.70	+0.1
3,214,596	+		TX73_014695	0.71	+0.3
3,214,597	-		TX73_014695	0.71	+0.3
3,214,604	-		TX73_014695	0.72	+0.2
3,214,604	-		TX73_014695	0.72	+1.4
3,214,609	-		TX73_014695	0.73	-0.6
3,214,619	+		TX73_014695	0.74	+1.0
3,214,662	-		TX73_014695	0.81	+0.5
3,214,687	+		TX73_014695	0.85	+0.9
3,214,687	+		TX73_014695	0.85	+0.1
3,214,687	+		TX73_014695	0.85	-0.2
3,214,689	-		TX73_014695	0.85	-1.4
3,214,695	+		TX73_014695	0.86	+1.8
3,214,695	-		TX73_014695	0.86	-0.1
3,214,695	-		TX73_014695	0.86	+0.4
3,214,697	+		TX73_014695	0.86	-0.5
3,214,702	+		TX73_014695	0.87	+0.1
3,214,705	-		TX73_014695	0.87	-0.1
3,214,705	-		TX73_014695	0.87	-0.9
3,214,705	-		TX73_014695	0.87	+0.5
3,214,705	-		TX73_014695	0.87	-0.2
3,214,729	+				+0.6
3,214,812	-				-0.4
3,214,841	+				-0.2
3,214,849	-				-1.0
3,214,849	-				+0.7
3,214,851	+				-0.5
3,214,851	+				-1.1
3,214,853	+				-0.2
3,214,853	+				-0.2
3,214,853	+				-1.5
3,214,853	+				+0.8
3,214,861	-				-1.2
3,214,861	-				-2.2
3,214,993	+				-0.4
3,215,022	+				-1.0
3,215,049	+		TX73_014700	0.10	+0.4
3,215,061	+		TX73_014700	0.14	-0.5
3,215,069	-		TX73_014700	0.16	+0.5
3,215,075	-		TX73_014700	0.17	-0.9
3,215,089	+		TX73_014700	0.21	+0.3
3,215,105	-		TX73_014700	0.25	-0.1
3,215,126	-		TX73_014700	0.31	+1.0
3,215,150	-		TX73_014700	0.37	+0.7
3,215,318	+		TX73_014700	0.82	+0.2
3,215,321	-		TX73_014700	0.83	+1.1
3,215,326	-		TX73_014700	0.84	+0.3
3,215,327	+		TX73_014700	0.85	-1.4
3,215,359	+				-0.5
3,215,359	+				-1.5
3,215,372	-				+0.4
3,215,398	-				-0.0
3,215,407	+				+0.5
3,215,440	-				+1.3
3,215,459	+		TX73_014705	0.12	-0.1
3,215,466	+		TX73_014705	0.14	+0.1
3,215,466	+		TX73_014705	0.14	+0.0
3,215,467	-		TX73_014705	0.14	-0.5
3,215,467	-		TX73_014705	0.14	-0.3
3,215,477	-		TX73_014705	0.16	-0.4
3,215,477	-		TX73_014705	0.16	+0.6
3,215,485	-		TX73_014705	0.17	-0.3
3,215,490	+		TX73_014705	0.18	+0.9
3,215,501	-		TX73_014705	0.20	-0.5
3,215,504	+		TX73_014705	0.21	+1.1
3,215,510	-		TX73_014705	0.22	+0.8
3,215,517	-		TX73_014705	0.23	-0.4
3,215,533	-		TX73_014705	0.27	-0.0
3,215,594	-		TX73_014705	0.38	+0.8
3,215,630	+		TX73_014705	0.45	+0.4
3,215,630	+		TX73_014705	0.45	-1.3
3,215,632	+		TX73_014705	0.45	+0.6
3,215,638	-		TX73_014705	0.46	+0.8
3,215,638	-		TX73_014705	0.46	-0.7
3,215,654	+		TX73_014705	0.49	-0.3
3,215,660	+		TX73_014705	0.51	+0.0
3,215,662	-		TX73_014705	0.51	+0.3
3,215,665	+		TX73_014705	0.52	-0.5
3,215,673	-		TX73_014705	0.53	+0.3
3,215,673	-		TX73_014705	0.53	+0.3
3,215,673	-		TX73_014705	0.53	-1.7
3,215,673	-		TX73_014705	0.53	-0.4
3,215,673	-		TX73_014705	0.53	+0.9
3,215,700	+		TX73_014705	0.58	+0.5
3,215,742	-		TX73_014705	0.66	+1.1
3,215,754	+		TX73_014705	0.68	+1.7
3,215,754	+		TX73_014705	0.68	+0.0
3,215,762	-		TX73_014705	0.70	-0.1
3,215,762	-		TX73_014705	0.70	-0.3
3,215,762	-		TX73_014705	0.70	-0.8
3,215,768	+		TX73_014705	0.71	-2.2
3,215,768	+		TX73_014705	0.71	+0.1
3,215,768	+		TX73_014705	0.71	+0.6