Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_022760

Experiment: 4-Aminobutyric (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C); anaerobic
4,943,397	-				-0.0
4,943,442	-				+0.4
4,943,446	+				-0.4
4,943,462	-				+0.6
4,943,462	-				+0.7
4,943,473	-				-0.7
4,943,487	+				-0.1
4,943,487	+				-0.8
4,943,487	+				+0.4
4,943,488	-				-1.7
4,943,488	-				-1.1
4,943,488	-				+0.4
4,943,495	-				+0.4
4,943,495	-				+1.0
4,943,495	-				+0.2
4,943,495	-				+0.0
4,943,495	-				-0.0
4,943,500	+				+0.4
4,943,504	+				+0.4
4,943,504	+				+0.1
4,943,538	+				-0.7
4,943,576	-				+0.4
4,943,597	+				+0.0
4,943,600	-				-0.1
4,943,604	-				-0.6
4,943,605	-				+0.5
4,943,613	-				-1.3
4,943,677	+				+0.0
4,943,677	+				-0.9
4,943,682	-				-0.6
4,943,689	-				-2.0
4,943,725	-				+1.2
4,943,726	-				+0.1
4,943,733	+				-0.4
4,943,735	+				+0.1
4,943,741	-				+1.0
4,943,743	-				+0.0
4,943,744	-				-1.8
4,943,800	-				-0.6
4,943,843	-		TX73_022755	0.18	-0.6
4,943,885	-		TX73_022755	0.27	-0.5
4,943,953	+		TX73_022755	0.41	+1.4
4,943,970	+		TX73_022755	0.44	-1.5
4,943,996	-		TX73_022755	0.49	-0.6
4,943,997	+		TX73_022755	0.50	-1.4
4,944,006	-		TX73_022755	0.52	-0.2
4,944,006	-		TX73_022755	0.52	-0.5
4,944,007	+		TX73_022755	0.52	-2.3
4,944,015	-		TX73_022755	0.53	+0.5
4,944,017	+		TX73_022755	0.54	+0.4
4,944,025	-		TX73_022755	0.55	+0.5
4,944,025	-		TX73_022755	0.55	-0.2
4,944,032	+		TX73_022755	0.57	+0.2
4,944,064	+		TX73_022755	0.63	+0.4
4,944,109	-		TX73_022755	0.73	-0.6
4,944,115	-		TX73_022755	0.74	+0.1
4,944,122	-		TX73_022755	0.75	+0.5
4,944,131	+		TX73_022755	0.77	-1.5
4,944,131	+		TX73_022755	0.77	+0.0
4,944,134	-		TX73_022755	0.78	-1.1
4,944,134	-		TX73_022755	0.78	+0.5
4,944,134	-		TX73_022755	0.78	+0.2
4,944,139	-		TX73_022755	0.79	+0.6
4,944,139	-		TX73_022755	0.79	+0.6
4,944,139	-		TX73_022755	0.79	+0.9
4,944,139	-		TX73_022755	0.79	-0.2
4,944,152	+		TX73_022755	0.81	+0.2
4,944,152	+		TX73_022755	0.81	+0.4
4,944,180	-		TX73_022755	0.87	+0.2
4,944,180	-		TX73_022755	0.87	+0.4
4,944,185	-		TX73_022755	0.88	-0.7
4,944,195	+				-0.3
4,944,195	+				+0.3
4,944,203	-				-1.4
4,944,205	+				-0.1
4,944,219	-				-0.4
4,944,225	+				+0.7
4,944,233	-				-0.8
4,944,233	-				-0.5
4,944,252	+				+0.5
4,944,270	+				-0.1
4,944,275	+				-0.6
4,944,275	+				+0.8
4,944,278	-				+0.4
4,944,278	-				-0.7
4,944,283	-				-0.2
4,944,283	-				+0.2
4,944,283	-				+0.3
4,944,283	-				+0.8
4,944,283	-				+0.4
4,944,283	-				+0.0
4,944,288	-				+0.7
4,944,367	+				-0.0
4,944,388	-				+0.6
4,944,403	+				+0.4
4,944,408	+				-2.1
4,944,421	-				-1.6
4,944,442	+				-2.6
4,944,445	-				-1.4
4,944,694	-		TX73_022760	0.36	-0.4
4,944,818	+		TX73_022760	0.50	-1.1
4,944,826	-		TX73_022760	0.51	-0.8
4,944,840	+		TX73_022760	0.52	-2.0
4,944,860	+		TX73_022760	0.55	+0.2
4,944,887	+		TX73_022760	0.58	-1.0
4,944,889	+		TX73_022760	0.58	-1.8
4,944,895	-		TX73_022760	0.59	-2.1
4,944,895	-		TX73_022760	0.59	-2.2
4,945,017	+		TX73_022760	0.73	-1.8
4,945,054	+		TX73_022760	0.77	-0.2
4,945,143	+		TX73_022760	0.87	-2.2
4,945,151	-		TX73_022760	0.88	-0.6
4,945,153	+		TX73_022760	0.88	-2.3
4,945,252	+				-0.0
4,945,260	-				-1.0
4,945,282	+				-0.1
4,945,282	+				+0.8
4,945,285	-				-0.3
4,945,328	-				-0.4
4,945,328	-				-0.1
4,945,328	-				+0.8
4,945,379	+		TX73_022765	0.14	-0.3
4,945,380	-		TX73_022765	0.14	+0.3
4,945,422	+		TX73_022765	0.21	+0.7
4,945,430	-		TX73_022765	0.23	+0.2
4,945,430	-		TX73_022765	0.23	+0.8
4,945,459	+		TX73_022765	0.28	-0.2
4,945,471	+		TX73_022765	0.30	-0.0
4,945,474	+		TX73_022765	0.31	+0.2
4,945,481	+		TX73_022765	0.32	+0.2
4,945,489	-		TX73_022765	0.34	+0.6
4,945,489	-		TX73_022765	0.34	+0.4
4,945,528	+		TX73_022765	0.41	+0.7
4,945,538	+		TX73_022765	0.43	-0.3
4,945,540	+		TX73_022765	0.43	-0.0
4,945,546	-		TX73_022765	0.44	-0.9
4,945,548	-		TX73_022765	0.44	+0.4
4,945,548	-		TX73_022765	0.44	-1.4
4,945,550	+		TX73_022765	0.45	-0.0
4,945,550	+		TX73_022765	0.45	-1.0
4,945,553	-		TX73_022765	0.45	+0.7
4,945,558	-		TX73_022765	0.46	+0.2
4,945,558	-		TX73_022765	0.46	-0.5
4,945,558	-		TX73_022765	0.46	+0.5
4,945,558	-		TX73_022765	0.46	+0.5
4,945,558	-		TX73_022765	0.46	-0.9
4,945,558	-		TX73_022765	0.46	-0.4
4,945,558	-		TX73_022765	0.46	+0.0
4,945,573	-		TX73_022765	0.49	+0.7
4,945,613	-		TX73_022765	0.56	+0.4
4,945,619	-		TX73_022765	0.57	+0.4
4,945,619	-		TX73_022765	0.57	+0.4
4,945,634	-		TX73_022765	0.60	+0.4
4,945,634	-		TX73_022765	0.60	+1.1
4,945,636	+		TX73_022765	0.60	+1.1
4,945,639	-		TX73_022765	0.61	-0.4
4,945,639	-		TX73_022765	0.61	-0.1
4,945,657	+		TX73_022765	0.64	+0.2
4,945,657	+		TX73_022765	0.64	-0.4
4,945,657	+		TX73_022765	0.64	-1.6
4,945,663	-		TX73_022765	0.65	-0.3
4,945,665	-		TX73_022765	0.66	+1.0
4,945,665	-		TX73_022765	0.66	-0.1
4,945,665	-		TX73_022765	0.66	-0.8
4,945,667	+		TX73_022765	0.66	-1.0
4,945,718	-		TX73_022765	0.75	-0.2
4,945,732	-		TX73_022765	0.78	-0.4
4,945,756	-		TX73_022765	0.82	+0.7
4,945,760	-		TX73_022765	0.83	-0.7
4,945,774	+		TX73_022765	0.86	-0.5
4,945,797	+		TX73_022765	0.90	+0.1
4,945,797	+		TX73_022765	0.90	-1.9
4,945,859	-				-0.0
4,945,859	-				+0.9
4,945,948	-				+0.5
4,945,958	+				-0.2
4,945,959	-				+0.5
4,945,960	+				-0.6
4,945,983	-				-0.3
4,945,984	+				-0.3
4,945,984	+				+0.3
4,945,985	+				-0.3
4,945,993	-				-0.7
4,946,028	+				-1.9
4,946,031	-				-1.7
4,946,050	+				-1.2
4,946,050	+				-0.4
4,946,101	+				+0.4
4,946,104	-				+0.7
4,946,106	-				+0.0
4,946,109	-				-0.1
4,946,111	-				-0.6
4,946,114	+				+0.0
4,946,114	+				+0.6
4,946,119	+				-1.3
4,946,122	-				+0.5
4,946,122	-				+1.3
4,946,127	-				-1.3
4,946,137	+				+2.9
4,946,137	+				-1.0
4,946,153	+		TX73_022770	0.17	-1.1
4,946,161	-		TX73_022770	0.21	+0.4
4,946,169	-		TX73_022770	0.25	+1.6
4,946,248	-		TX73_022770	0.61	-2.0
4,946,248	-		TX73_022770	0.61	+2.4