Experiment: 4-Aminobutyric (C); anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_002195 and TX73_002200 are separated by 252 nucleotides TX73_002200 and TX73_002205 are separated by 107 nucleotides TX73_002205 and TX73_002210 are separated by 300 nucleotides TX73_002210 and TX73_002215 are separated by 61 nucleotides
TX73_002195: TX73_002195 - D-glycerate dehydrogenase, at 464,181 to 465,182
_002195
TX73_002200: TX73_002200 - SH3 domain-containing protein, at 465,435 to 465,941
_002200
TX73_002205: TX73_002205 - Fur family transcriptional regulator, at 466,049 to 466,498
_002205
TX73_002210: TX73_002210 - bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase, at 466,799 to 467,326
_002210
TX73_002215: TX73_002215 - beta-ketoacyl-ACP synthase I, at 467,388 to 468,614
_002215
Position (kb) 466
467 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 465.059 kb on + strand, within TX73_002195 at 465.067 kb on - strand, within TX73_002195 at 465.067 kb on - strand, within TX73_002195 at 465.077 kb on - strand, within TX73_002195 at 465.077 kb on - strand, within TX73_002195 at 465.080 kb on + strand, within TX73_002195 at 465.085 kb on + strand at 465.093 kb on - strand at 465.093 kb on - strand at 465.097 kb on + strand at 465.105 kb on - strand at 465.107 kb on + strand at 465.115 kb on - strand at 465.115 kb on - strand at 465.140 kb on + strand at 465.147 kb on + strand at 465.159 kb on - strand at 465.180 kb on + strand at 465.191 kb on + strand at 465.237 kb on + strand at 465.237 kb on + strand at 465.237 kb on + strand at 465.237 kb on + strand at 465.246 kb on + strand at 465.254 kb on - strand at 465.254 kb on - strand at 465.262 kb on + strand at 465.262 kb on + strand at 465.264 kb on + strand at 465.269 kb on + strand at 465.269 kb on + strand at 465.280 kb on + strand at 465.282 kb on - strand at 465.282 kb on - strand at 465.295 kb on - strand at 465.312 kb on - strand at 465.312 kb on - strand at 465.317 kb on + strand at 465.318 kb on - strand at 465.333 kb on + strand at 465.334 kb on + strand at 465.342 kb on - strand at 465.342 kb on - strand at 465.347 kb on - strand at 465.351 kb on + strand at 465.351 kb on + strand at 465.351 kb on + strand at 465.353 kb on - strand at 465.359 kb on + strand at 465.359 kb on + strand at 465.359 kb on + strand at 465.359 kb on + strand at 465.359 kb on + strand at 465.359 kb on - strand at 465.367 kb on - strand at 465.367 kb on - strand at 465.401 kb on + strand at 465.401 kb on + strand at 465.409 kb on - strand at 465.411 kb on - strand at 465.449 kb on + strand at 465.932 kb on + strand at 465.946 kb on + strand at 465.965 kb on + strand at 465.967 kb on - strand at 465.968 kb on + strand at 465.976 kb on - strand at 465.993 kb on + strand at 465.993 kb on + strand at 466.001 kb on - strand at 466.003 kb on - strand at 466.010 kb on + strand at 466.010 kb on + strand at 466.013 kb on - strand at 466.018 kb on - strand at 466.085 kb on - strand at 466.085 kb on - strand at 466.092 kb on + strand at 466.096 kb on + strand, within TX73_002205 at 466.100 kb on - strand, within TX73_002205 at 466.102 kb on - strand, within TX73_002205 at 466.108 kb on - strand, within TX73_002205 at 466.130 kb on - strand, within TX73_002205 at 466.157 kb on - strand, within TX73_002205 at 466.159 kb on + strand, within TX73_002205 at 466.161 kb on - strand, within TX73_002205 at 466.176 kb on + strand, within TX73_002205 at 466.176 kb on + strand, within TX73_002205 at 466.184 kb on - strand, within TX73_002205 at 466.212 kb on + strand, within TX73_002205 at 466.217 kb on + strand, within TX73_002205 at 466.233 kb on + strand, within TX73_002205 at 466.241 kb on - strand, within TX73_002205 at 466.255 kb on - strand, within TX73_002205 at 466.270 kb on + strand, within TX73_002205 at 466.270 kb on + strand, within TX73_002205 at 466.271 kb on + strand, within TX73_002205 at 466.271 kb on + strand, within TX73_002205 at 466.278 kb on + strand, within TX73_002205 at 466.278 kb on + strand, within TX73_002205 at 466.278 kb on - strand, within TX73_002205 at 466.279 kb on - strand, within TX73_002205 at 466.280 kb on + strand, within TX73_002205 at 466.280 kb on + strand, within TX73_002205 at 466.280 kb on + strand, within TX73_002205 at 466.280 kb on + strand, within TX73_002205 at 466.280 kb on + strand, within TX73_002205 at 466.286 kb on - strand, within TX73_002205 at 466.286 kb on - strand, within TX73_002205 at 466.286 kb on - strand, within TX73_002205 at 466.286 kb on - strand, within TX73_002205 at 466.288 kb on - strand, within TX73_002205 at 466.288 kb on - strand, within TX73_002205 at 466.288 kb on - strand, within TX73_002205 at 466.288 kb on - strand, within TX73_002205 at 466.288 kb on - strand, within TX73_002205 at 466.308 kb on + strand, within TX73_002205 at 466.308 kb on + strand, within TX73_002205 at 466.308 kb on + strand, within TX73_002205 at 466.308 kb on + strand, within TX73_002205 at 466.313 kb on + strand, within TX73_002205 at 466.313 kb on + strand, within TX73_002205 at 466.317 kb on + strand, within TX73_002205 at 466.326 kb on + strand, within TX73_002205 at 466.363 kb on - strand, within TX73_002205 at 466.364 kb on - strand, within TX73_002205 at 466.377 kb on + strand, within TX73_002205 at 466.377 kb on + strand, within TX73_002205 at 466.432 kb on - strand, within TX73_002205 at 466.441 kb on + strand, within TX73_002205 at 466.452 kb on + strand, within TX73_002205 at 466.468 kb on - strand at 466.482 kb on - strand at 466.483 kb on + strand at 466.488 kb on + strand at 466.489 kb on - strand at 466.491 kb on - strand at 466.493 kb on + strand at 466.500 kb on + strand at 466.532 kb on - strand at 466.543 kb on - strand at 466.549 kb on + strand at 466.550 kb on + strand at 466.554 kb on + strand at 466.558 kb on - strand at 466.558 kb on - strand at 466.558 kb on - strand at 466.558 kb on - strand at 466.558 kb on - strand at 466.566 kb on + strand at 466.570 kb on - strand at 466.574 kb on - strand at 466.574 kb on - strand at 466.600 kb on - strand at 466.609 kb on + strand at 466.617 kb on + strand at 466.654 kb on - strand at 466.665 kb on + strand at 466.690 kb on - strand at 466.692 kb on + strand at 466.695 kb on + strand at 466.695 kb on + strand at 466.695 kb on + strand at 466.695 kb on + strand at 466.695 kb on - strand at 466.702 kb on + strand at 466.703 kb on - strand at 466.711 kb on + strand at 466.712 kb on + strand at 466.744 kb on - strand at 466.756 kb on - strand at 467.346 kb on + strand at 467.354 kb on - strand at 467.354 kb on - strand at 467.354 kb on - strand at 467.354 kb on - strand at 467.371 kb on - strand at 467.382 kb on + strand at 467.387 kb on + strand at 467.387 kb on + strand at 467.387 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Aminobutyric (C); anaerobic remove 465,059 + TX73_002195 0.88 +0.9 465,067 - TX73_002195 0.88 +0.2 465,067 - TX73_002195 0.88 -0.4 465,077 - TX73_002195 0.89 +2.0 465,077 - TX73_002195 0.89 +0.5 465,080 + TX73_002195 0.90 -0.1 465,085 + +1.6 465,093 - +0.9 465,093 - +1.3 465,097 + +0.3 465,105 - +0.6 465,107 + +1.0 465,115 - +0.9 465,115 - +0.2 465,140 + +1.1 465,147 + +1.4 465,159 - +0.7 465,180 + +0.4 465,191 + -0.0 465,237 + -0.0 465,237 + -0.1 465,237 + -0.5 465,237 + +0.2 465,246 + +1.2 465,254 - -0.5 465,254 - -1.0 465,262 + -0.6 465,262 + +0.5 465,264 + +0.1 465,269 + +1.9 465,269 + +0.2 465,280 + +0.0 465,282 - +1.3 465,282 - -0.3 465,295 - +0.5 465,312 - +1.4 465,312 - +0.6 465,317 + -0.3 465,318 - -0.8 465,333 + +0.5 465,334 + +0.4 465,342 - -1.1 465,342 - +0.4 465,347 - +0.5 465,351 + +0.5 465,351 + +0.5 465,351 + +0.0 465,353 - +0.5 465,359 + +1.0 465,359 + +1.0 465,359 + +0.1 465,359 + +0.8 465,359 + +0.3 465,359 - -0.7 465,367 - -0.7 465,367 - +2.2 465,401 + -1.5 465,401 + +0.0 465,409 - -0.2 465,411 - +0.0 465,449 + +0.6 465,932 + +1.6 465,946 + -0.4 465,965 + -0.1 465,967 - +0.4 465,968 + -0.3 465,976 - -0.1 465,993 + -0.0 465,993 + -0.6 466,001 - +2.0 466,003 - -0.0 466,010 + +0.7 466,010 + -0.3 466,013 - -0.7 466,018 - -0.6 466,085 - +2.7 466,085 - +0.7 466,092 + +1.0 466,096 + TX73_002205 0.10 +0.5 466,100 - TX73_002205 0.11 +0.4 466,102 - TX73_002205 0.12 +0.9 466,108 - TX73_002205 0.13 -0.0 466,130 - TX73_002205 0.18 +0.8 466,157 - TX73_002205 0.24 +0.9 466,159 + TX73_002205 0.24 +1.9 466,161 - TX73_002205 0.25 +0.6 466,176 + TX73_002205 0.28 +0.8 466,176 + TX73_002205 0.28 +0.8 466,184 - TX73_002205 0.30 +1.2 466,212 + TX73_002205 0.36 +2.0 466,217 + TX73_002205 0.37 +0.9 466,233 + TX73_002205 0.41 +1.4 466,241 - TX73_002205 0.43 +1.6 466,255 - TX73_002205 0.46 +0.6 466,270 + TX73_002205 0.49 +1.0 466,270 + TX73_002205 0.49 +0.2 466,271 + TX73_002205 0.49 +1.6 466,271 + TX73_002205 0.49 +0.9 466,278 + TX73_002205 0.51 +0.2 466,278 + TX73_002205 0.51 +1.3 466,278 - TX73_002205 0.51 +1.1 466,279 - TX73_002205 0.51 +1.1 466,280 + TX73_002205 0.51 +1.2 466,280 + TX73_002205 0.51 +0.9 466,280 + TX73_002205 0.51 +1.5 466,280 + TX73_002205 0.51 +0.3 466,280 + TX73_002205 0.51 +0.3 466,286 - TX73_002205 0.53 +0.4 466,286 - TX73_002205 0.53 +1.0 466,286 - TX73_002205 0.53 +0.4 466,286 - TX73_002205 0.53 +1.6 466,288 - TX73_002205 0.53 +1.1 466,288 - TX73_002205 0.53 +1.5 466,288 - TX73_002205 0.53 +0.1 466,288 - TX73_002205 0.53 +1.5 466,288 - TX73_002205 0.53 +0.6 466,308 + TX73_002205 0.58 +0.2 466,308 + TX73_002205 0.58 -0.6 466,308 + TX73_002205 0.58 -0.0 466,308 + TX73_002205 0.58 +2.0 466,313 + TX73_002205 0.59 +0.7 466,313 + TX73_002205 0.59 +2.3 466,317 + TX73_002205 0.60 +0.6 466,326 + TX73_002205 0.62 +0.9 466,363 - TX73_002205 0.70 +0.3 466,364 - TX73_002205 0.70 +0.4 466,377 + TX73_002205 0.73 +0.8 466,377 + TX73_002205 0.73 +1.4 466,432 - TX73_002205 0.85 +0.7 466,441 + TX73_002205 0.87 +0.8 466,452 + TX73_002205 0.90 +0.1 466,468 - +0.4 466,482 - +0.5 466,483 + +0.6 466,488 + +0.3 466,489 - +0.9 466,491 - +0.5 466,493 + +0.2 466,500 + -0.3 466,532 - +0.3 466,543 - +0.6 466,549 + +1.1 466,550 + +0.3 466,554 + +0.6 466,558 - +0.6 466,558 - +0.4 466,558 - -0.0 466,558 - -0.5 466,558 - +0.5 466,566 + +0.8 466,570 - -0.4 466,574 - +0.6 466,574 - -1.2 466,600 - +0.4 466,609 + -0.4 466,617 + -0.3 466,654 - -0.6 466,665 + +0.2 466,690 - -0.3 466,692 + -0.4 466,695 + +1.0 466,695 + -1.2 466,695 + -1.7 466,695 + -0.6 466,695 - +1.0 466,702 + +0.2 466,703 - -0.5 466,711 + +0.2 466,712 + -1.2 466,744 - +0.1 466,756 - +1.1 467,346 + +0.2 467,354 - -0.2 467,354 - -1.2 467,354 - -2.9 467,354 - +0.1 467,371 - +1.8 467,382 + +1.2 467,387 + -0.9 467,387 + -0.0 467,387 + -0.0
Or see this region's nucleotide sequence