Experiment: 4-Aminobutyric (C); anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_014130 and TX73_014135 are separated by 130 nucleotides TX73_014135 and TX73_014140 are separated by 5 nucleotides TX73_014140 and TX73_014145 are separated by 202 nucleotides
TX73_014130: TX73_014130 - riboflavin synthase, at 3,097,005 to 3,097,613
_014130
TX73_014135: TX73_014135 - 6,7-dimethyl-8-ribityllumazine synthase, at 3,097,744 to 3,098,235
_014135
TX73_014140: TX73_014140 - transcription antitermination factor NusB, at 3,098,241 to 3,098,765
_014140
TX73_014145: TX73_014145 - thiamine-phosphate kinase, at 3,098,968 to 3,099,939
_014145
Position (kb)
3098
3099 Strain fitness (log2 ratio)
-1
0
1 at 3097.621 kb on + strand at 3097.621 kb on + strand at 3097.634 kb on + strand at 3097.634 kb on + strand at 3097.642 kb on - strand at 3097.642 kb on - strand at 3097.642 kb on - strand at 3097.694 kb on - strand at 3097.700 kb on + strand at 3097.731 kb on - strand at 3097.742 kb on - strand at 3098.273 kb on + strand at 3098.302 kb on - strand, within TX73_014140 at 3098.306 kb on + strand, within TX73_014140 at 3098.755 kb on + strand at 3098.773 kb on + strand at 3098.774 kb on - strand at 3098.778 kb on + strand at 3098.778 kb on + strand at 3098.778 kb on + strand at 3098.778 kb on + strand at 3098.779 kb on + strand at 3098.786 kb on - strand at 3098.786 kb on - strand at 3098.787 kb on - strand at 3098.787 kb on - strand at 3098.797 kb on + strand at 3098.797 kb on + strand at 3098.798 kb on - strand at 3098.801 kb on + strand at 3098.801 kb on + strand at 3098.814 kb on - strand at 3098.827 kb on - strand at 3098.829 kb on + strand at 3098.841 kb on + strand at 3098.841 kb on + strand at 3098.844 kb on + strand at 3098.849 kb on + strand at 3098.854 kb on + strand at 3098.876 kb on - strand at 3098.888 kb on - strand at 3098.889 kb on - strand at 3098.895 kb on + strand at 3098.899 kb on - strand at 3098.906 kb on + strand at 3098.906 kb on + strand at 3098.908 kb on + strand at 3098.933 kb on - strand at 3098.985 kb on - strand at 3099.003 kb on + strand at 3099.003 kb on + strand at 3099.003 kb on + strand at 3099.011 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Aminobutyric (C); anaerobic remove 3,097,621 + -0.2 3,097,621 + -0.4 3,097,634 + -0.1 3,097,634 + -0.5 3,097,642 - +0.1 3,097,642 - +0.4 3,097,642 - +0.4 3,097,694 - -0.3 3,097,700 + -0.6 3,097,731 - +0.2 3,097,742 - -0.9 3,098,273 + +0.4 3,098,302 - TX73_014140 0.12 -0.3 3,098,306 + TX73_014140 0.12 -0.5 3,098,755 + +0.4 3,098,773 + -0.4 3,098,774 - +0.2 3,098,778 + -0.2 3,098,778 + -0.4 3,098,778 + -0.9 3,098,778 + +0.8 3,098,779 + +0.2 3,098,786 - -0.4 3,098,786 - +0.6 3,098,787 - -0.5 3,098,787 - -1.2 3,098,797 + -0.3 3,098,797 + -0.5 3,098,798 - -0.0 3,098,801 + +0.1 3,098,801 + +0.2 3,098,814 - -0.3 3,098,827 - +0.6 3,098,829 + -0.2 3,098,841 + +0.0 3,098,841 + -0.2 3,098,844 + +0.6 3,098,849 + -0.2 3,098,854 + +0.0 3,098,876 - +0.2 3,098,888 - -0.8 3,098,889 - -0.9 3,098,895 + -0.8 3,098,899 - -0.0 3,098,906 + +0.7 3,098,906 + +0.1 3,098,908 + +0.2 3,098,933 - +0.8 3,098,985 - -0.5 3,099,003 + +0.1 3,099,003 + +0.3 3,099,003 + -0.4 3,099,011 - +0.4
Or see this region's nucleotide sequence