Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_012575

Experiment: 4-Aminobutyric (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C); anaerobic
2,759,677	+		TX73_012570	0.38	-0.9
2,759,677	+		TX73_012570	0.38	+2.2
2,759,687	-		TX73_012570	0.39	-0.6
2,759,738	+		TX73_012570	0.43	-0.7
2,759,755	-		TX73_012570	0.44	+0.3
2,759,783	-		TX73_012570	0.47	+1.4
2,759,849	+		TX73_012570	0.52	-0.5
2,759,849	+		TX73_012570	0.52	+0.3
2,759,857	-		TX73_012570	0.53	+0.2
2,759,877	+		TX73_012570	0.54	-0.1
2,759,889	+		TX73_012570	0.55	+0.2
2,759,957	-		TX73_012570	0.61	-0.1
2,760,018	-		TX73_012570	0.66	-0.9
2,760,050	-		TX73_012570	0.69	-0.9
2,760,066	-		TX73_012570	0.70	+0.6
2,760,095	-		TX73_012570	0.72	+0.2
2,760,104	+		TX73_012570	0.73	+0.7
2,760,104	-		TX73_012570	0.73	+0.5
2,760,123	-		TX73_012570	0.75	+0.5
2,760,124	+		TX73_012570	0.75	+0.6
2,760,132	-		TX73_012570	0.75	+0.4
2,760,142	-		TX73_012570	0.76	+0.3
2,760,142	-		TX73_012570	0.76	+0.3
2,760,146	+		TX73_012570	0.77	+1.0
2,760,152	+		TX73_012570	0.77	-0.3
2,760,154	+		TX73_012570	0.77	+0.2
2,760,162	+		TX73_012570	0.78	-0.1
2,760,201	-		TX73_012570	0.81	+0.2
2,760,203	-		TX73_012570	0.81	-2.0
2,760,211	+		TX73_012570	0.82	-1.0
2,760,220	+		TX73_012570	0.83	+0.2
2,760,243	+		TX73_012570	0.84	-0.3
2,760,263	+		TX73_012570	0.86	-0.6
2,760,263	+		TX73_012570	0.86	-0.6
2,760,271	-		TX73_012570	0.87	-0.8
2,760,271	-		TX73_012570	0.87	-0.4
2,760,276	+		TX73_012570	0.87	+0.2
2,760,282	-		TX73_012570	0.88	-0.1
2,760,297	+		TX73_012570	0.89	+1.2
2,760,327	-				-0.4
2,760,364	+				+0.6
2,760,374	+				+0.5
2,760,382	-				+0.1
2,760,414	+				+0.2
2,760,422	-				+0.1
2,760,431	+				-0.8
2,760,439	-				+0.6
2,760,471	-				-0.8
2,760,505	-				-0.5
2,760,567	-				+0.3
2,760,577	+				-0.0
2,760,585	+				-0.3
2,760,619	+				+0.8
2,760,619	+				-0.4
2,760,620	+				-1.4
2,760,628	-				+0.1
2,760,629	-				+0.0
2,760,636	+				+0.3
2,760,677	+				+0.1
2,760,685	+				-0.4
2,760,696	+				-0.1
2,760,719	+				+0.7
2,760,742	-		TX73_012575	0.10	-0.9
2,760,809	-		TX73_012575	0.20	-0.5
2,760,830	+		TX73_012575	0.23	-1.2
2,760,838	-		TX73_012575	0.24	-0.4
2,760,845	+		TX73_012575	0.25	-0.0
2,760,856	+		TX73_012575	0.27	-0.3
2,760,864	-		TX73_012575	0.28	-0.1
2,760,866	+		TX73_012575	0.29	-0.7
2,760,875	-		TX73_012575	0.30	+0.7
2,760,886	-		TX73_012575	0.32	-0.4
2,760,928	+		TX73_012575	0.38	+0.9
2,760,933	+		TX73_012575	0.39	-0.7
2,760,936	-		TX73_012575	0.39	+0.1
2,760,941	-		TX73_012575	0.40	+0.2
2,760,967	-		TX73_012575	0.44	-0.7
2,760,977	+		TX73_012575	0.45	-0.1
2,760,977	+		TX73_012575	0.45	-0.3
2,760,980	-		TX73_012575	0.46	+1.7
2,760,985	+		TX73_012575	0.46	+0.4
2,761,009	+		TX73_012575	0.50	-0.5
2,761,017	-		TX73_012575	0.51	-0.7
2,761,017	-		TX73_012575	0.51	+0.6
2,761,019	+		TX73_012575	0.51	-0.7
2,761,043	+		TX73_012575	0.55	-0.5
2,761,049	+		TX73_012575	0.56	+0.2
2,761,051	-		TX73_012575	0.56	-0.2
2,761,057	+		TX73_012575	0.57	+0.1
2,761,057	-		TX73_012575	0.57	-1.5
2,761,065	-		TX73_012575	0.58	+1.2
2,761,065	-		TX73_012575	0.58	-0.5
2,761,065	-		TX73_012575	0.58	-0.7
2,761,065	-		TX73_012575	0.58	+0.1
2,761,066	-		TX73_012575	0.58	-0.9
2,761,079	+		TX73_012575	0.60	+0.1
2,761,083	+		TX73_012575	0.61	-1.0
2,761,086	-		TX73_012575	0.61	-0.0
2,761,086	-		TX73_012575	0.61	+0.4
2,761,105	+		TX73_012575	0.64	-0.7
2,761,105	+		TX73_012575	0.64	+0.2
2,761,123	+		TX73_012575	0.67	+0.2
2,761,123	+		TX73_012575	0.67	-0.2
2,761,123	+		TX73_012575	0.67	+0.1
2,761,125	+		TX73_012575	0.67	-0.1
2,761,129	+		TX73_012575	0.68	-0.5
2,761,131	-		TX73_012575	0.68	+0.1
2,761,131	-		TX73_012575	0.68	+0.1
2,761,131	-		TX73_012575	0.68	-1.2
2,761,138	-		TX73_012575	0.69	-0.3
2,761,190	+		TX73_012575	0.77	-1.9
2,761,210	+		TX73_012575	0.80	-0.0
2,761,312	+				-0.4
2,761,327	+				+0.6
2,761,330	-				-1.3
2,761,340	-				-0.2
2,761,340	-				+0.5
2,761,371	-				+0.2
2,761,387	-				-1.3
2,761,432	-				-0.5
2,761,435	+				+0.4
2,761,441	-				+0.6
2,761,449	+				-1.1
2,761,449	+				+0.0
2,761,455	+				-0.2
2,761,457	-				+0.3
2,761,462	-				-0.3
2,761,468	-				+0.2
2,761,470	+				+0.3
2,761,473	-				-1.6
2,761,476	+				-0.0
2,761,478	+				-0.3
2,761,478	-				-0.7
2,761,532	+				-0.8
2,761,558	+				-0.3
2,761,558	+				-1.2
2,761,558	+				-0.9
2,761,566	-				-0.5
2,761,589	-		TX73_012580	0.10	-0.7
2,761,618	+		TX73_012580	0.13	+0.3
2,761,621	-		TX73_012580	0.13	-1.4
2,761,621	-		TX73_012580	0.13	-2.1
2,761,622	-		TX73_012580	0.13	-0.9
2,761,626	-		TX73_012580	0.14	+0.5
2,761,626	-		TX73_012580	0.14	-0.4
2,761,632	-		TX73_012580	0.14	-0.5
2,761,638	+		TX73_012580	0.15	-0.3
2,761,644	+		TX73_012580	0.15	-0.1
2,761,644	+		TX73_012580	0.15	+0.9
2,761,644	+		TX73_012580	0.15	+0.5
2,761,652	-		TX73_012580	0.16	-0.8
2,761,658	-		TX73_012580	0.16	-0.7
2,761,684	+		TX73_012580	0.19	+0.1
2,761,711	+		TX73_012580	0.21	+0.5
2,761,736	-		TX73_012580	0.24	-0.7
2,761,782	+		TX73_012580	0.28	-0.9
2,761,805	+		TX73_012580	0.30	-0.7
2,761,805	+		TX73_012580	0.30	-0.3
2,761,805	+		TX73_012580	0.30	-0.2
2,761,813	-		TX73_012580	0.31	+0.1
2,761,813	-		TX73_012580	0.31	+0.2
2,761,838	+		TX73_012580	0.33	-0.0
2,761,874	+		TX73_012580	0.36	-0.8
2,761,874	+		TX73_012580	0.36	+0.7
2,761,874	+		TX73_012580	0.36	-1.6
2,761,882	-		TX73_012580	0.37	-0.2
2,761,882	-		TX73_012580	0.37	-1.8
2,761,882	-		TX73_012580	0.37	-1.2
2,761,938	+		TX73_012580	0.42	-0.9
2,761,938	+		TX73_012580	0.42	+0.1
2,761,938	+		TX73_012580	0.42	+0.0
2,761,938	+		TX73_012580	0.42	+0.2
2,761,938	+		TX73_012580	0.42	+0.0
2,761,938	+		TX73_012580	0.42	-1.1
2,761,946	-		TX73_012580	0.43	+0.4
2,761,946	-		TX73_012580	0.43	-0.4
2,761,946	-		TX73_012580	0.43	-0.4
2,761,986	+		TX73_012580	0.47	-1.1
2,761,987	-		TX73_012580	0.47	-0.4
2,761,991	+		TX73_012580	0.47	-0.4
2,761,994	-		TX73_012580	0.47	-0.6
2,762,001	+		TX73_012580	0.48	+0.6
2,762,001	+		TX73_012580	0.48	-0.3
2,762,009	-		TX73_012580	0.49	-0.1
2,762,009	-		TX73_012580	0.49	-0.8
2,762,009	-		TX73_012580	0.49	-0.0
2,762,052	-		TX73_012580	0.53	-1.9
2,762,067	+		TX73_012580	0.54	-0.5
2,762,088	+		TX73_012580	0.56	-1.1
2,762,193	-		TX73_012580	0.65	+0.1
2,762,225	-		TX73_012580	0.68	-0.4
2,762,253	-		TX73_012580	0.71	-0.1
2,762,327	-		TX73_012580	0.78	-1.3