Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_009885

Experiment: 4-Aminobutyric (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C); anaerobic
2,149,883	+		TX73_009875	0.86	+0.3
2,149,883	+		TX73_009875	0.86	-0.4
2,149,903	-		TX73_009875	0.88	-1.1
2,150,003	-				+0.4
2,150,008	+				+0.1
2,150,031	+				-0.9
2,150,050	+				-0.3
2,150,052	+				+0.5
2,150,055	+				+0.1
2,150,058	-				-0.0
2,150,135	+				+0.5
2,150,137	-				-0.2
2,150,143	-				+0.3
2,150,158	-				+0.1
2,150,166	+				-0.2
2,150,166	+				+0.8
2,150,169	-				-0.2
2,150,173	+				-0.2
2,150,180	+				-1.4
2,150,181	+				+0.1
2,150,229	+		TX73_009880	0.13	-1.2
2,150,229	+		TX73_009880	0.13	-0.5
2,150,231	-		TX73_009880	0.13	+0.3
2,150,237	-		TX73_009880	0.14	-1.2
2,150,237	-		TX73_009880	0.14	-0.2
2,150,246	+		TX73_009880	0.16	+0.4
2,150,254	-		TX73_009880	0.18	+0.1
2,150,267	-		TX73_009880	0.21	-0.7
2,150,272	-		TX73_009880	0.22	+1.4
2,150,313	+		TX73_009880	0.31	-0.1
2,150,365	-		TX73_009880	0.42	+0.2
2,150,379	-		TX73_009880	0.45	-0.3
2,150,381	+		TX73_009880	0.45	-0.7
2,150,381	+		TX73_009880	0.45	-0.5
2,150,389	-		TX73_009880	0.47	-0.1
2,150,414	+		TX73_009880	0.52	-0.8
2,150,447	+		TX73_009880	0.60	+0.2
2,150,447	-		TX73_009880	0.60	-0.1
2,150,484	+		TX73_009880	0.68	+0.2
2,150,492	-		TX73_009880	0.69	-0.6
2,150,498	-		TX73_009880	0.71	+0.2
2,150,508	-		TX73_009880	0.73	-0.1
2,150,510	+		TX73_009880	0.73	-1.2
2,150,510	+		TX73_009880	0.73	+0.3
2,150,513	-		TX73_009880	0.74	-0.5
2,150,518	-		TX73_009880	0.75	-0.7
2,150,518	-		TX73_009880	0.75	-0.2
2,150,518	-		TX73_009880	0.75	+1.4
2,150,518	-		TX73_009880	0.75	+0.1
2,150,528	-		TX73_009880	0.77	+1.0
2,150,576	-		TX73_009880	0.87	+0.2
2,150,589	+				+0.0
2,150,599	+				+0.5
2,150,599	+				+0.4
2,150,599	+				-0.6
2,150,599	+				-0.5
2,150,599	+				-0.1
2,150,599	+				+0.7
2,150,599	+				+0.7
2,150,599	+				-1.0
2,150,599	+				+1.0
2,150,599	+				+0.7
2,150,607	-				-0.3
2,150,607	-				+0.3
2,150,607	-				-0.1
2,150,609	+				+0.0
2,150,613	+				+0.1
2,150,621	-				+1.8
2,150,621	-				-2.2
2,150,621	-				+0.2
2,150,623	+				-0.2
2,150,623	+				+0.3
2,150,623	+				+0.3
2,150,623	+				-0.2
2,150,623	+				+0.0
2,150,623	+				-0.4
2,150,623	+				-0.3
2,150,623	+				-0.0
2,150,626	-				+0.6
2,150,628	+				-0.3
2,150,631	-				-0.3
2,150,631	-				+0.1
2,150,631	-				+0.8
2,150,631	-				+1.3
2,150,652	-				+0.4
2,150,700	+				+0.0
2,150,700	+				+0.2
2,150,700	+				-0.4
2,150,700	+				+0.3
2,150,708	-				+0.6
2,150,708	-				-0.2
2,150,708	-				-0.1
2,150,708	-				+0.1
2,150,708	-				+1.6
2,150,708	-				+0.5
2,150,708	-				-1.1
2,150,737	+				+0.5
2,150,737	+				+0.5
2,150,743	-				-0.3
2,150,745	-				+0.5
2,150,746	+				+0.1
2,150,746	+				+0.5
2,150,776	+				-0.5
2,150,776	+				+0.1
2,150,776	+				-0.6
2,150,776	+				+0.2
2,150,776	-				-0.1
2,150,777	-				+0.2
2,150,777	-				+0.5
2,150,801	-				-0.2
2,150,804	+				-0.1
2,150,829	+				-0.5
2,150,861	+				+0.1
2,150,861	+				-0.9
2,150,867	+				+0.1
2,150,880	+				+0.6
2,150,903	-				-0.4
2,150,903	-				-2.2
2,150,913	+				+0.5
2,150,913	+				-0.1
2,150,913	+				-0.4
2,150,913	+				+0.1
2,150,913	+				+0.6
2,150,915	+				+2.3
2,150,921	-				+0.4
2,150,921	-				+0.9
2,150,921	-				-0.1
2,150,923	+				+0.8
2,150,943	-				-0.4
2,150,948	+				-0.1
2,150,956	-				-0.7
2,150,966	-				+1.0
2,150,966	-				+0.7
2,150,982	-				-1.1
2,150,986	+				-0.4
2,150,995	-				-0.2
2,151,017	+		TX73_009885	0.11	-0.2
2,151,025	-		TX73_009885	0.12	-0.1
2,151,030	+		TX73_009885	0.12	-0.4
2,151,041	+		TX73_009885	0.13	+0.4
2,151,044	+		TX73_009885	0.13	+0.7
2,151,044	-		TX73_009885	0.13	-0.0
2,151,049	+		TX73_009885	0.14	+0.0
2,151,121	-		TX73_009885	0.19	-0.6
2,151,121	-		TX73_009885	0.19	-0.1
2,151,123	+		TX73_009885	0.19	+0.2
2,151,126	-		TX73_009885	0.19	-0.5
2,151,131	-		TX73_009885	0.20	+0.6
2,151,136	+		TX73_009885	0.20	+0.3
2,151,143	+		TX73_009885	0.20	-0.1
2,151,156	-		TX73_009885	0.21	+0.1
2,151,167	-		TX73_009885	0.22	-0.8
2,151,176	+		TX73_009885	0.23	+0.1
2,151,213	-		TX73_009885	0.25	+0.2
2,151,240	+		TX73_009885	0.27	+0.2
2,151,249	+		TX73_009885	0.28	-0.3
2,151,253	-		TX73_009885	0.28	-0.8
2,151,262	+		TX73_009885	0.29	+0.8
2,151,262	+		TX73_009885	0.29	-0.2
2,151,270	-		TX73_009885	0.29	+0.4
2,151,300	-		TX73_009885	0.32	+0.4
2,151,302	+		TX73_009885	0.32	+0.1
2,151,302	+		TX73_009885	0.32	+0.7
2,151,305	-		TX73_009885	0.32	-0.2
2,151,305	-		TX73_009885	0.32	-0.2
2,151,342	+		TX73_009885	0.35	+0.6
2,151,378	+		TX73_009885	0.37	+0.2
2,151,388	+		TX73_009885	0.38	-0.3
2,151,417	+		TX73_009885	0.40	-0.4
2,151,429	+		TX73_009885	0.41	-0.3
2,151,441	+		TX73_009885	0.42	-0.1
2,151,450	+		TX73_009885	0.42	-1.1
2,151,450	-		TX73_009885	0.42	+0.6
2,151,463	-		TX73_009885	0.43	+0.9
2,151,494	+		TX73_009885	0.45	-0.5
2,151,542	-		TX73_009885	0.49	+0.6
2,151,583	+		TX73_009885	0.52	-0.3
2,151,602	+		TX73_009885	0.53	-0.4
2,151,606	-		TX73_009885	0.53	+0.1
2,151,620	-		TX73_009885	0.54	-0.1
2,151,620	-		TX73_009885	0.54	+0.9
2,151,620	-		TX73_009885	0.54	+0.2
2,151,620	-		TX73_009885	0.54	+0.3
2,151,620	-		TX73_009885	0.54	+0.7
2,151,620	-		TX73_009885	0.54	-0.9
2,151,630	+		TX73_009885	0.55	+0.4
2,151,631	+		TX73_009885	0.55	-1.2
2,151,631	+		TX73_009885	0.55	+0.6
2,151,643	+		TX73_009885	0.56	+0.1
2,151,675	+		TX73_009885	0.58	-0.0
2,151,683	-		TX73_009885	0.59	+1.0
2,151,688	-		TX73_009885	0.59	-0.0
2,151,688	-		TX73_009885	0.59	+0.5
2,151,758	+		TX73_009885	0.64	+0.5
2,151,783	-		TX73_009885	0.66	+0.4
2,151,837	+		TX73_009885	0.70	+0.2
2,151,856	+		TX73_009885	0.71	-0.5
2,151,858	+		TX73_009885	0.71	+1.0
2,151,859	+		TX73_009885	0.71	+0.1
2,151,870	+		TX73_009885	0.72	+1.1
2,151,913	+		TX73_009885	0.75	-0.2
2,151,950	-		TX73_009885	0.78	+1.5
2,151,950	-		TX73_009885	0.78	-0.0
2,151,950	-		TX73_009885	0.78	-0.7
2,151,959	+		TX73_009885	0.78	-0.6
2,151,967	-		TX73_009885	0.79	-0.6
2,151,987	+		TX73_009885	0.80	+1.0
2,151,987	+		TX73_009885	0.80	+0.1
2,151,995	-		TX73_009885	0.81	-0.8
2,151,995	-		TX73_009885	0.81	+0.5
2,152,001	-		TX73_009885	0.81	+0.5
2,152,002	-		TX73_009885	0.82	+1.7
2,152,035	+		TX73_009885	0.84	+1.3
2,152,048	-		TX73_009885	0.85	+0.7
2,152,100	+		TX73_009885	0.89	-0.3
2,152,107	-		TX73_009885	0.89	-0.1
2,152,108	-		TX73_009885	0.89	+0.6
2,152,121	-				+0.2
2,152,121	-				+0.3
2,152,133	+				-1.3
2,152,137	+				-0.2
2,152,145	-				+0.2
2,152,150	+				-0.4
2,152,189	+				-0.6
2,152,192	+				+1.0
2,152,217	-				-0.1
2,152,221	+				+0.3
2,152,222	+				-1.0
2,152,223	+				+0.3
2,152,234	-				-0.5
2,152,241	-				-0.4
2,152,300	+				+0.2
2,152,328	-				-0.7
2,152,332	-				-0.1
2,152,336	+				+0.2
2,152,344	-				+0.2
2,152,346	+				+0.5
2,152,347	+				-0.4
2,152,347	+				-0.0
2,152,347	+				+1.5
2,152,348	+				+1.3
2,152,355	-				-0.5
2,152,355	-				-0.2
2,152,356	-				+0.3
2,152,391	+				-0.1
2,152,391	+				+0.5
2,152,391	+				+0.0
2,152,394	+				+0.5
2,152,402	-				+1.1
2,152,413	-				+0.3