Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_017175

Experiment: 4-Aminobutyric (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Aminobutyric (C); anaerobic
3,747,211	+		TX73_017170	0.38	+1.5
3,747,230	-		TX73_017170	0.39	-0.1
3,747,280	+		TX73_017170	0.42	+0.9
3,747,303	+		TX73_017170	0.44	+0.8
3,747,304	+		TX73_017170	0.44	+1.3
3,747,311	-		TX73_017170	0.44	+2.0
3,747,311	-		TX73_017170	0.44	+0.8
3,747,346	-		TX73_017170	0.47	+1.5
3,747,357	-		TX73_017170	0.47	+0.1
3,747,387	+		TX73_017170	0.49	+0.6
3,747,393	+		TX73_017170	0.50	+0.2
3,747,393	+		TX73_017170	0.50	-0.2
3,747,401	+		TX73_017170	0.50	+0.4
3,747,401	+		TX73_017170	0.50	+1.7
3,747,401	-		TX73_017170	0.50	+0.3
3,747,406	+		TX73_017170	0.51	+1.9
3,747,440	-		TX73_017170	0.53	+1.3
3,747,461	-		TX73_017170	0.54	-0.4
3,747,470	+		TX73_017170	0.55	+0.9
3,747,470	+		TX73_017170	0.55	+1.3
3,747,532	-		TX73_017170	0.59	+0.9
3,747,608	-		TX73_017170	0.64	+1.0
3,747,610	+		TX73_017170	0.64	-0.1
3,747,618	-		TX73_017170	0.65	+0.5
3,747,657	-		TX73_017170	0.67	+0.3
3,747,667	+		TX73_017170	0.68	-0.5
3,747,674	-		TX73_017170	0.69	-0.1
3,747,694	+		TX73_017170	0.70	-0.1
3,747,702	-		TX73_017170	0.70	+1.2
3,747,725	+		TX73_017170	0.72	+0.7
3,747,768	+		TX73_017170	0.75	+0.3
3,747,803	+		TX73_017170	0.77	+0.7
3,747,813	+		TX73_017170	0.78	+1.1
3,747,821	-		TX73_017170	0.78	+0.8
3,747,831	-		TX73_017170	0.79	+0.6
3,747,860	+		TX73_017170	0.81	+0.8
3,747,861	+		TX73_017170	0.81	+1.1
3,747,868	-		TX73_017170	0.81	-2.4
3,747,868	-		TX73_017170	0.81	+0.7
3,747,868	-		TX73_017170	0.81	-0.9
3,747,909	-		TX73_017170	0.84	-0.4
3,747,991	+		TX73_017170	0.90	+0.3
3,747,994	-		TX73_017170	0.90	+0.9
3,747,998	+				+1.4
3,747,999	-				+0.7
3,747,999	-				+0.2
3,748,006	+				-0.2
3,748,028	-				+1.0
3,748,033	-				-0.8
3,748,114	-				-0.1
3,748,114	-				+0.6
3,748,149	-				-0.6
3,748,224	-				+0.7
3,748,266	-				+1.1
3,748,268	+				+1.1
3,748,366	+		TX73_017175	0.12	+1.2
3,748,391	+		TX73_017175	0.14	-0.2
3,748,391	+		TX73_017175	0.14	+1.1
3,748,415	+		TX73_017175	0.16	+0.9
3,748,438	-		TX73_017175	0.17	+0.5
3,748,462	+		TX73_017175	0.19	-0.0
3,748,462	+		TX73_017175	0.19	-0.2
3,748,470	-		TX73_017175	0.19	+0.9
3,748,500	+		TX73_017175	0.22	+1.2
3,748,516	+		TX73_017175	0.23	-0.4
3,748,537	+		TX73_017175	0.24	+1.0
3,748,558	+		TX73_017175	0.26	+0.4
3,748,566	-		TX73_017175	0.26	+0.8
3,748,566	-		TX73_017175	0.26	-0.0
3,748,566	-		TX73_017175	0.26	+1.2
3,748,623	+		TX73_017175	0.30	+0.1
3,748,623	+		TX73_017175	0.30	+0.2
3,748,623	+		TX73_017175	0.30	+0.9
3,748,631	-		TX73_017175	0.31	+1.7
3,748,644	-		TX73_017175	0.32	+1.6
3,748,656	+		TX73_017175	0.32	+1.0
3,748,675	-		TX73_017175	0.34	+1.7
3,748,716	-		TX73_017175	0.37	+0.2
3,748,749	+		TX73_017175	0.39	+1.2
3,748,749	+		TX73_017175	0.39	+1.0
3,748,764	+		TX73_017175	0.40	+0.8
3,748,764	+		TX73_017175	0.40	+0.7
3,748,764	+		TX73_017175	0.40	+1.1
3,748,772	-		TX73_017175	0.40	+0.6
3,748,772	-		TX73_017175	0.40	+0.9
3,748,783	+		TX73_017175	0.41	+0.5
3,748,873	+		TX73_017175	0.47	+1.5
3,748,896	-		TX73_017175	0.49	+0.5
3,748,959	+		TX73_017175	0.53	+0.7
3,748,972	+		TX73_017175	0.54	+1.1
3,748,980	-		TX73_017175	0.55	+1.5
3,749,022	+		TX73_017175	0.58	+1.2
3,749,027	+		TX73_017175	0.58	+0.6
3,749,043	+		TX73_017175	0.59	+0.9
3,749,056	+		TX73_017175	0.60	+0.5
3,749,059	+		TX73_017175	0.60	-0.6
3,749,061	+		TX73_017175	0.61	+1.6
3,749,085	+		TX73_017175	0.62	-0.9
3,749,093	-		TX73_017175	0.63	-0.2
3,749,147	-		TX73_017175	0.67	+0.5
3,749,156	+		TX73_017175	0.67	+0.7
3,749,184	-		TX73_017175	0.69	+0.5
3,749,190	-		TX73_017175	0.70	+0.1
3,749,197	-		TX73_017175	0.70	+1.1
3,749,249	-		TX73_017175	0.74	+0.9
3,749,311	+		TX73_017175	0.78	+0.6
3,749,350	+		TX73_017175	0.81	-0.3
3,749,358	-		TX73_017175	0.81	+0.9
3,749,417	-		TX73_017175	0.85	-1.0
3,749,464	-		TX73_017175	0.89	+0.3
3,749,468	+		TX73_017175	0.89	+0.8
3,749,553	-				+0.8
3,749,553	-				+1.0
3,749,610	+				+0.5
3,749,610	-				+0.6
3,749,610	-				+1.1
3,749,653	-				-0.3
3,749,664	-				+0.1
3,749,680	+				+0.2
3,749,686	+				+0.4
3,749,692	+				-0.1
3,749,692	+				-0.0
3,749,700	-				+0.7
3,749,717	+				+1.2
3,749,720	-				+1.2
3,749,734	+				-0.2
3,749,747	-				-0.5
3,749,749	-				-0.9
3,749,749	-				+0.0
3,749,759	+				+0.3
3,749,759	+				-0.1
3,749,759	+				-0.2
3,749,759	+				+0.3
3,749,759	+				-0.2
3,749,767	-				+0.6
3,749,767	-				-0.1
3,749,767	-				-0.2
3,749,767	-				+0.1
3,749,790	-				+0.6
3,749,820	-				+0.7
3,749,830	-				-0.1
3,749,859	-				+1.1
3,749,896	+				-0.8
3,749,896	+				+0.3
3,749,919	-				+0.4
3,749,932	+				-0.2
3,749,942	+				-0.6
3,749,950	-				-0.1
3,749,953	-				-0.6
3,749,955	+				-0.5
3,749,979	-				+0.4
3,749,999	+				+0.4
3,750,027	+				+0.3
3,750,038	+				-0.0
3,750,039	+				+0.3
3,750,047	-		TX73_017180	0.10	+1.0
3,750,118	+		TX73_017180	0.14	+0.4
3,750,126	-		TX73_017180	0.15	-0.4
3,750,134	+		TX73_017180	0.15	+0.1
3,750,163	-		TX73_017180	0.17	-0.6
3,750,201	+		TX73_017180	0.19	-0.9
3,750,210	+		TX73_017180	0.20	-0.4
3,750,220	+		TX73_017180	0.20	+0.5
3,750,257	+		TX73_017180	0.22	-0.8
3,750,306	+		TX73_017180	0.25	+1.9
3,750,320	-		TX73_017180	0.26	-0.2
3,750,371	-		TX73_017180	0.29	+0.4
3,750,398	+		TX73_017180	0.30	-1.1
3,750,512	+		TX73_017180	0.37	+0.4
3,750,526	-		TX73_017180	0.37	-0.0
3,750,529	-		TX73_017180	0.38	+0.2
3,750,581	+		TX73_017180	0.40	+0.6
3,750,583	+		TX73_017180	0.41	+0.9
3,750,605	+		TX73_017180	0.42	+0.5
3,750,606	+		TX73_017180	0.42	-0.1
3,750,606	+		TX73_017180	0.42	+0.0
3,750,612	+		TX73_017180	0.42	+0.1
3,750,614	-		TX73_017180	0.42	+0.1
3,750,620	-		TX73_017180	0.43	-0.7