Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_005735

Experiment: starvation expt 3; 14 days; outgrowth in CAAc

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	starvation expt 3; 14 days; outgrowth in CAAc
1,216,946	+		TX73_005725	0.15	+0.1
1,216,946	+		TX73_005725	0.15	+0.4
1,216,946	+		TX73_005725	0.15	-0.4
1,216,954	-		TX73_005725	0.16	-0.6
1,216,959	+		TX73_005725	0.17	-0.4
1,216,963	+		TX73_005725	0.18	-0.0
1,216,976	-		TX73_005725	0.21	+0.1
1,216,976	-		TX73_005725	0.21	-0.8
1,217,008	+		TX73_005725	0.28	-0.3
1,217,008	+		TX73_005725	0.28	-1.1
1,217,008	+		TX73_005725	0.28	-1.5
1,217,008	+		TX73_005725	0.28	-0.2
1,217,016	+		TX73_005725	0.29	-0.5
1,217,021	+		TX73_005725	0.31	-0.4
1,217,021	+		TX73_005725	0.31	-0.3
1,217,021	+		TX73_005725	0.31	-0.8
1,217,023	+		TX73_005725	0.31	-0.1
1,217,023	+		TX73_005725	0.31	+0.1
1,217,031	+		TX73_005725	0.33	-1.0
1,217,031	+		TX73_005725	0.33	+0.1
1,217,031	+		TX73_005725	0.33	-1.4
1,217,143	+		TX73_005725	0.57	-0.1
1,217,145	-		TX73_005725	0.57	+0.2
1,217,153	+		TX73_005725	0.59	-0.6
1,217,153	+		TX73_005725	0.59	-0.5
1,217,173	+		TX73_005725	0.63	-1.4
1,217,259	+		TX73_005725	0.81	-0.6
1,217,262	-		TX73_005725	0.82	-1.1
1,217,264	+		TX73_005725	0.82	-0.1
1,217,282	-		TX73_005725	0.86	-0.9
1,217,292	+		TX73_005725	0.88	+2.6
1,217,298	+		TX73_005725	0.90	-0.9
1,217,305	-				-0.9
1,217,305	-				-0.3
1,217,310	-				+0.6
1,217,334	+				-0.1
1,217,334	+				-0.1
1,217,334	+				+0.6
1,217,339	+				+0.1
1,217,342	-				-0.5
1,217,344	+				-0.4
1,217,356	+				-0.4
1,217,356	+				-0.2
1,217,359	-				+0.6
1,217,359	-				-0.7
1,217,364	-				-0.1
1,217,365	+				+0.1
1,217,373	-				-0.5
1,217,392	+				-0.0
1,217,454	+				-0.5
1,217,454	+				-0.2
1,217,454	+				-0.2
1,217,459	+				-0.0
1,217,459	+				+0.0
1,217,464	+				+0.6
1,217,467	-				+0.2
1,217,467	-				+0.2
1,217,467	-				+0.4
1,217,467	-				+0.1
1,217,486	-				+0.6
1,217,491	+				-0.5
1,217,506	+				+0.8
1,217,506	+				+1.4
1,217,519	-				+0.1
1,217,535	+				-0.1
1,217,535	+				-0.2
1,217,543	-		TX73_005730	0.10	+0.1
1,217,580	+		TX73_005730	0.18	+1.2
1,217,580	+		TX73_005730	0.18	+0.6
1,217,580	+		TX73_005730	0.18	+0.3
1,217,580	+		TX73_005730	0.18	-0.9
1,217,588	-		TX73_005730	0.20	-0.7
1,217,588	-		TX73_005730	0.20	-0.2
1,217,605	+		TX73_005730	0.24	-0.1
1,217,613	-		TX73_005730	0.25	-0.8
1,217,619	+		TX73_005730	0.26	+1.2
1,217,653	-		TX73_005730	0.34	-0.0
1,217,656	+		TX73_005730	0.34	+0.3
1,217,659	+		TX73_005730	0.35	-0.4
1,217,663	+		TX73_005730	0.36	-0.6
1,217,667	-		TX73_005730	0.37	+0.5
1,217,676	+		TX73_005730	0.39	-0.1
1,217,676	+		TX73_005730	0.39	-0.2
1,217,676	+		TX73_005730	0.39	+0.1
1,217,698	+		TX73_005730	0.43	+0.1
1,217,731	+		TX73_005730	0.50	+0.3
1,217,731	+		TX73_005730	0.50	-0.1
1,217,731	+		TX73_005730	0.50	-0.2
1,217,731	+		TX73_005730	0.50	-0.6
1,217,731	+		TX73_005730	0.50	-1.1
1,217,731	+		TX73_005730	0.50	+0.0
1,217,739	-		TX73_005730	0.52	+0.2
1,217,739	-		TX73_005730	0.52	-0.2
1,217,739	-		TX73_005730	0.52	+0.3
1,217,749	-		TX73_005730	0.54	+0.7
1,217,769	-		TX73_005730	0.59	-0.0
1,217,815	-		TX73_005730	0.68	-1.9
1,217,844	+		TX73_005730	0.75	-0.6
1,217,882	+		TX73_005730	0.83	+0.2
1,217,888	+		TX73_005730	0.84	+0.9
1,217,918	-				-0.3
1,217,918	-				-0.8
1,217,920	+				+0.2
1,217,947	+				+0.1
1,217,956	+				-1.0
1,217,961	+				+0.6
1,217,961	+				+0.4
1,217,975	+				-0.2
1,217,979	-				+0.5
1,218,020	-				+0.6
1,218,042	+		TX73_005735	0.11	+0.2
1,218,065	-		TX73_005735	0.13	+0.1
1,218,120	-		TX73_005735	0.19	+0.4
1,218,145	+		TX73_005735	0.22	+0.9
1,218,148	+		TX73_005735	0.22	-0.6
1,218,153	+		TX73_005735	0.23	-0.8
1,218,160	+		TX73_005735	0.24	-0.1
1,218,163	-		TX73_005735	0.24	-0.7
1,218,168	+		TX73_005735	0.25	-0.3
1,218,168	+		TX73_005735	0.25	+0.6
1,218,191	-		TX73_005735	0.27	-0.7
1,218,199	+		TX73_005735	0.28	+0.6
1,218,204	-		TX73_005735	0.28	+0.6
1,218,204	-		TX73_005735	0.28	+0.1
1,218,205	-		TX73_005735	0.29	-0.4
1,218,208	+		TX73_005735	0.29	+0.1
1,218,243	-		TX73_005735	0.33	-0.9
1,218,268	+		TX73_005735	0.36	-0.8
1,218,276	-		TX73_005735	0.36	-0.1
1,218,295	-		TX73_005735	0.39	+0.4
1,218,296	+		TX73_005735	0.39	-0.8
1,218,304	-		TX73_005735	0.40	-0.4
1,218,311	-		TX73_005735	0.40	-0.1
1,218,357	-		TX73_005735	0.45	-0.5
1,218,367	-		TX73_005735	0.46	-0.3
1,218,372	-		TX73_005735	0.47	+0.9
1,218,377	-		TX73_005735	0.48	-0.1
1,218,418	+		TX73_005735	0.52	-0.6
1,218,418	+		TX73_005735	0.52	-0.1
1,218,418	+		TX73_005735	0.52	-0.4
1,218,418	+		TX73_005735	0.52	-0.2
1,218,425	+		TX73_005735	0.53	-1.4
1,218,430	+		TX73_005735	0.53	-0.6
1,218,438	-		TX73_005735	0.54	-1.2
1,218,457	+		TX73_005735	0.56	+0.1
1,218,462	+		TX73_005735	0.57	-0.8
1,218,486	+		TX73_005735	0.60	-0.1
1,218,491	+		TX73_005735	0.60	+0.1
1,218,499	-		TX73_005735	0.61	+0.7
1,218,499	-		TX73_005735	0.61	-0.4
1,218,501	+		TX73_005735	0.61	+0.3
1,218,509	-		TX73_005735	0.62	-0.3
1,218,511	+		TX73_005735	0.62	-0.6
1,218,536	+		TX73_005735	0.65	+0.1
1,218,590	+		TX73_005735	0.71	+0.3
1,218,600	+		TX73_005735	0.72	-1.2
1,218,608	-		TX73_005735	0.73	-0.6
1,218,608	-		TX73_005735	0.73	-0.8
1,218,610	-		TX73_005735	0.73	+0.3
1,218,632	+		TX73_005735	0.76	+0.6
1,218,644	+		TX73_005735	0.77	-0.0
1,218,674	+		TX73_005735	0.80	+0.2
1,218,682	-		TX73_005735	0.81	+0.9
1,218,682	-		TX73_005735	0.81	-0.6
1,218,701	+		TX73_005735	0.83	+0.2
1,218,707	-		TX73_005735	0.84	+0.1
1,218,707	-		TX73_005735	0.84	-0.6
1,218,714	-		TX73_005735	0.85	-0.7
1,218,729	-		TX73_005735	0.86	-0.3
1,218,729	-		TX73_005735	0.86	-0.2
1,218,729	-		TX73_005735	0.86	-0.7
1,218,730	+		TX73_005735	0.87	+0.6
1,218,738	-		TX73_005735	0.87	-1.4
1,218,738	-		TX73_005735	0.87	+0.1
1,218,742	-		TX73_005735	0.88	+0.5
1,218,743	-		TX73_005735	0.88	-0.6
1,218,743	-		TX73_005735	0.88	-0.0
1,218,762	-				+0.3
1,218,770	+				-0.4
1,218,789	+				+0.6
1,218,820	+				+0.3
1,218,820	+				-0.6
1,218,825	+				+0.1
1,218,830	+				-0.1
1,218,833	-				-0.4
1,218,835	+				-0.1
1,218,835	+				-0.1
1,218,838	-				+0.3
1,218,838	-				+0.5
1,218,838	-				-2.0
1,218,838	-				-0.2
1,218,840	+				-0.1
1,218,840	+				-0.4
1,218,845	+				+0.1
1,218,845	+				+0.3
1,218,848	-				-1.5
1,218,848	-				-0.4
1,218,848	-				+0.3
1,218,848	-				+0.2
1,218,848	-				-0.4
1,218,848	-				-0.3
1,218,848	-				-1.6
1,218,848	-				+0.1
1,218,848	-				+0.5
1,218,848	-				-0.1
1,218,848	-				+0.3
1,218,848	-				+0.1
1,218,848	-				-0.8
1,218,848	-				+0.6
1,218,848	-				-0.7
1,218,853	-				+0.4
1,218,855	+				+0.3
1,218,879	+				+0.4
1,218,937	-				-0.6
1,218,942	-				-2.1
1,219,007	+				+0.3
1,219,021	+				+0.0
1,219,021	+				+0.3
1,219,021	+				+0.2
1,219,021	+				-0.8
1,219,021	+				+0.3
1,219,021	+				+0.7
1,219,022	-				-0.5
1,219,029	-				-1.4
1,219,029	-				-1.4
1,219,031	+				+0.6
1,219,031	+				+0.3
1,219,031	+				+0.5
1,219,054	-				-0.1
1,219,056	+				-0.2
1,219,074	+				+0.2
1,219,077	-				+0.2
1,219,082	-				-1.2
1,219,088	+				-0.7
1,219,139	-				+0.9
1,219,849	+				-1.0