Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_019855

Experiment: starvation expt 1; 14 days; outgrowth in CAAc

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	starvation expt 1; 14 days; outgrowth in CAAc
4,327,052	+		TX73_019850	0.50	+0.2
4,327,094	+		TX73_019850	0.53	+1.3
4,327,094	+		TX73_019850	0.53	+0.0
4,327,107	+		TX73_019850	0.54	-0.6
4,327,107	+		TX73_019850	0.54	-1.7
4,327,107	+		TX73_019850	0.54	-0.1
4,327,107	+		TX73_019850	0.54	-0.9
4,327,107	+		TX73_019850	0.54	-0.2
4,327,107	+		TX73_019850	0.54	-0.7
4,327,115	-		TX73_019850	0.55	-1.1
4,327,115	-		TX73_019850	0.55	-0.0
4,327,115	-		TX73_019850	0.55	+1.1
4,327,115	-		TX73_019850	0.55	+0.2
4,327,142	-		TX73_019850	0.57	+0.5
4,327,154	+		TX73_019850	0.58	+0.7
4,327,160	-		TX73_019850	0.59	+0.6
4,327,162	-		TX73_019850	0.59	+1.8
4,327,165	-		TX73_019850	0.59	-1.7
4,327,166	+		TX73_019850	0.59	-0.8
4,327,179	-		TX73_019850	0.60	+0.2
4,327,179	-		TX73_019850	0.60	+1.4
4,327,197	+		TX73_019850	0.62	-0.2
4,327,221	+		TX73_019850	0.64	-0.4
4,327,229	-		TX73_019850	0.65	+0.1
4,327,242	+		TX73_019850	0.66	+1.4
4,327,244	-		TX73_019850	0.66	+0.6
4,327,247	+		TX73_019850	0.66	-1.1
4,327,247	+		TX73_019850	0.66	-0.2
4,327,268	+		TX73_019850	0.68	-1.4
4,327,276	-		TX73_019850	0.68	+0.4
4,327,319	-		TX73_019850	0.72	-0.7
4,327,324	-		TX73_019850	0.72	+0.7
4,327,330	+		TX73_019850	0.73	-0.1
4,327,347	+		TX73_019850	0.74	+0.1
4,327,347	+		TX73_019850	0.74	-0.9
4,327,347	+		TX73_019850	0.74	-1.0
4,327,347	+		TX73_019850	0.74	-0.0
4,327,347	+		TX73_019850	0.74	-1.7
4,327,347	+		TX73_019850	0.74	-0.8
4,327,347	+		TX73_019850	0.74	+1.0
4,327,347	+		TX73_019850	0.74	-1.2
4,327,347	+		TX73_019850	0.74	-0.4
4,327,353	+		TX73_019850	0.75	+0.7
4,327,355	-		TX73_019850	0.75	+0.3
4,327,355	-		TX73_019850	0.75	-0.8
4,327,355	-		TX73_019850	0.75	-0.7
4,327,355	-		TX73_019850	0.75	-0.3
4,327,355	-		TX73_019850	0.75	-2.2
4,327,365	-		TX73_019850	0.76	-1.0
4,327,366	-		TX73_019850	0.76	-0.6
4,327,374	+		TX73_019850	0.77	+0.1
4,327,374	+		TX73_019850	0.77	+1.1
4,327,380	+		TX73_019850	0.77	+1.4
4,327,382	-		TX73_019850	0.77	-0.9
4,327,390	+		TX73_019850	0.78	-0.3
4,327,392	+		TX73_019850	0.78	-1.4
4,327,397	+		TX73_019850	0.79	-0.8
4,327,398	-		TX73_019850	0.79	-0.5
4,327,400	-		TX73_019850	0.79	-0.3
4,327,400	-		TX73_019850	0.79	+1.4
4,327,405	-		TX73_019850	0.79	-0.5
4,327,408	+		TX73_019850	0.79	+0.2
4,327,419	+		TX73_019850	0.80	-0.3
4,327,419	+		TX73_019850	0.80	+0.7
4,327,421	+		TX73_019850	0.81	-0.1
4,327,427	-		TX73_019850	0.81	-0.9
4,327,427	-		TX73_019850	0.81	-0.4
4,327,429	-		TX73_019850	0.81	-0.3
4,327,437	-		TX73_019850	0.82	-0.8
4,327,438	+		TX73_019850	0.82	-0.1
4,327,444	+		TX73_019850	0.82	-0.4
4,327,450	+		TX73_019850	0.83	-1.6
4,327,464	+		TX73_019850	0.84	+0.1
4,327,504	+		TX73_019850	0.87	-0.8
4,327,512	-		TX73_019850	0.88	+0.3
4,327,528	+		TX73_019850	0.89	-0.4
4,327,536	-				+2.4
4,327,556	+				+0.2
4,327,556	-				+0.1
4,327,557	+				+0.0
4,327,576	+				+0.2
4,327,576	+				+0.0
4,327,576	+				-3.1
4,327,584	-				-0.6
4,327,584	-				-0.2
4,327,584	-				+1.6
4,327,584	-				-0.5
4,327,584	-				-0.2
4,327,600	-				-0.1
4,327,602	+				+0.0
4,327,604	+				-0.4
4,327,617	+				-0.6
4,327,623	+				-0.0
4,327,631	-				+0.4
4,327,631	-				+0.8
4,327,633	+				-1.6
4,327,638	+				+0.5
4,327,644	+				+1.0
4,327,658	-				+0.4
4,327,687	-				-2.1
4,327,687	-				-0.4
4,327,687	-				+0.3
4,327,687	-				-0.3
4,327,692	-				-0.2
4,327,696	-				+0.2
4,327,699	+				-0.2
4,327,699	+				-0.6
4,327,707	-				-0.2
4,327,710	-				+0.4
4,327,721	-				+0.6
4,327,726	-				-0.2
4,327,813	+				-0.1
4,327,822	-				-0.4
4,327,823	+				-0.4
4,327,823	+				-0.8
4,327,835	+				+1.1
4,327,858	+				+0.2
4,327,860	-				+2.0
4,327,912	-				-0.3
4,327,970	+				+0.3
4,327,970	+				-0.7
4,327,970	+				+0.2
4,327,970	+				+0.7
4,327,970	+				-0.6
4,327,978	-				+0.8
4,327,978	-				-0.1
4,327,978	-				+0.6
4,327,978	-				+0.1
4,327,978	-				-0.2
4,327,978	-				+0.8
4,327,978	-				+0.1
4,327,978	-				-0.8
4,327,978	-				+0.2
4,327,978	-				+0.7
4,327,978	-				+0.5
4,327,980	-				-0.5
4,329,234	+				+1.8
4,329,242	-				-1.4
4,329,263	-				+1.0
4,329,268	+				+0.4
4,329,356	+				-0.9
4,329,368	+				+0.4
4,329,376	-				-1.0
4,329,386	+				+0.6
4,329,423	+				-0.2
4,329,442	+				+0.1
4,329,480	+				+0.7
4,329,488	-				-1.8
4,329,546	-		TX73_019860	0.10	+0.2
4,329,584	+		TX73_019860	0.12	-0.1
4,329,660	+		TX73_019860	0.16	-2.8
4,329,668	-		TX73_019860	0.17	+0.2
4,329,670	-		TX73_019860	0.17	+0.3
4,329,694	-		TX73_019860	0.18	-0.4
4,329,696	+		TX73_019860	0.18	-0.4
4,329,696	+		TX73_019860	0.18	-0.1
4,329,696	+		TX73_019860	0.18	+0.4
4,329,696	+		TX73_019860	0.18	-0.1
4,329,701	+		TX73_019860	0.18	+1.3
4,329,701	+		TX73_019860	0.18	+0.4
4,329,704	-		TX73_019860	0.19	+0.2
4,329,704	-		TX73_019860	0.19	+0.3
4,329,711	+		TX73_019860	0.19	-0.6
4,329,711	+		TX73_019860	0.19	-0.4
4,329,735	+		TX73_019860	0.20	-0.3
4,329,798	-		TX73_019860	0.24	+0.6
4,329,819	+		TX73_019860	0.25	+0.3
4,329,834	-		TX73_019860	0.25	+0.4
4,329,842	+		TX73_019860	0.26	+0.1
4,329,856	-		TX73_019860	0.27	+0.3
4,329,858	+		TX73_019860	0.27	+0.6
4,329,863	+		TX73_019860	0.27	-0.5
4,329,875	-		TX73_019860	0.28	-0.0
4,329,885	-		TX73_019860	0.28	-0.6
4,329,894	+		TX73_019860	0.29	+0.2
4,329,921	-		TX73_019860	0.30	+1.4
4,329,931	-		TX73_019860	0.31	+0.4
4,329,942	-		TX73_019860	0.31	-0.5
4,329,951	+		TX73_019860	0.32	+0.7
4,329,951	+		TX73_019860	0.32	+0.6
4,329,969	-		TX73_019860	0.33	+0.6
4,329,974	+		TX73_019860	0.33	+0.1
4,329,987	-		TX73_019860	0.33	+0.2
4,329,993	-		TX73_019860	0.34	+0.1
4,330,003	+		TX73_019860	0.34	+0.0
4,330,048	-		TX73_019860	0.37	+0.4
4,330,201	-		TX73_019860	0.45	+0.5
4,330,206	+		TX73_019860	0.45	-0.7
4,330,206	-		TX73_019860	0.45	+0.3
4,330,211	+		TX73_019860	0.45	-0.3
4,330,214	-		TX73_019860	0.45	+1.0
4,330,219	-		TX73_019860	0.46	+0.8