Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_019310

Experiment: starvation expt 1; 14 days; outgrowth in CAAc

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	starvation expt 1; 14 days; outgrowth in CAAc
4,210,417	-		TX73_019305	0.23	+0.1
4,210,436	-		TX73_019305	0.25	+0.5
4,210,438	+		TX73_019305	0.25	+0.4
4,210,438	+		TX73_019305	0.25	-0.2
4,210,468	+		TX73_019305	0.28	+0.1
4,210,483	-		TX73_019305	0.29	+0.6
4,210,485	-		TX73_019305	0.29	+1.3
4,210,486	+		TX73_019305	0.29	-0.8
4,210,557	+		TX73_019305	0.36	+0.4
4,210,597	-		TX73_019305	0.40	+0.7
4,210,661	+		TX73_019305	0.46	-1.9
4,210,669	-		TX73_019305	0.47	+0.6
4,210,751	+		TX73_019305	0.55	+0.4
4,210,789	-		TX73_019305	0.59	-0.0
4,210,817	+		TX73_019305	0.61	+0.4
4,210,825	-		TX73_019305	0.62	-1.1
4,210,863	-		TX73_019305	0.66	-0.5
4,210,863	-		TX73_019305	0.66	-0.3
4,210,907	-		TX73_019305	0.70	-0.3
4,210,910	+		TX73_019305	0.70	+0.6
4,210,931	+		TX73_019305	0.72	-0.0
4,210,993	+		TX73_019305	0.78	-0.7
4,211,001	-		TX73_019305	0.79	-0.1
4,211,032	-		TX73_019305	0.82	+0.3
4,211,041	-		TX73_019305	0.83	-0.2
4,211,096	+		TX73_019305	0.88	+0.1
4,211,115	+		TX73_019305	0.90	+1.1
4,211,121	-				+0.5
4,211,128	-				-0.2
4,211,128	-				+0.3
4,211,145	-				+1.6
4,211,152	+				+0.4
4,211,164	-				+0.5
4,211,209	-				-0.1
4,211,211	+				+1.2
4,211,211	+				+0.1
4,211,220	+				+0.7
4,211,220	+				-0.3
4,211,271	+				+0.8
4,211,295	-				+0.8
4,211,301	-				-0.2
4,211,317	+				+1.3
4,211,377	-				-0.3
4,211,458	-				-2.4
4,211,514	+				+0.4
4,211,658	+		TX73_019310	0.12	+0.3
4,211,727	-		TX73_019310	0.16	+0.4
4,211,751	-		TX73_019310	0.17	-0.6
4,211,764	-		TX73_019310	0.18	+1.6
4,211,779	-		TX73_019310	0.18	-0.7
4,211,799	-		TX73_019310	0.19	-0.6
4,211,807	-		TX73_019310	0.20	+0.9
4,211,857	+		TX73_019310	0.22	+0.3
4,211,862	+		TX73_019310	0.23	+0.0
4,211,941	-		TX73_019310	0.26	-0.9
4,211,948	+		TX73_019310	0.27	+0.2
4,211,956	-		TX73_019310	0.27	-0.6
4,211,957	-		TX73_019310	0.27	+0.4
4,211,987	-		TX73_019310	0.29	-0.8
4,212,002	+		TX73_019310	0.29	-0.1
4,212,051	+		TX73_019310	0.32	+0.0
4,212,072	+		TX73_019310	0.33	+1.0
4,212,101	-		TX73_019310	0.34	-0.6
4,212,101	-		TX73_019310	0.34	-0.3
4,212,106	-		TX73_019310	0.35	+0.6
4,212,149	-		TX73_019310	0.37	-1.9
4,212,151	+		TX73_019310	0.37	-1.4
4,212,170	+		TX73_019310	0.38	+1.0
4,212,186	+		TX73_019310	0.39	+0.1
4,212,209	+		TX73_019310	0.40	-0.1
4,212,219	+		TX73_019310	0.40	-0.3
4,212,237	-		TX73_019310	0.41	+0.3
4,212,310	-		TX73_019310	0.45	-0.5
4,212,314	+		TX73_019310	0.45	+0.2
4,212,322	-		TX73_019310	0.45	-1.1
4,212,325	-		TX73_019310	0.46	+0.6
4,212,332	+		TX73_019310	0.46	+0.5
4,212,350	+		TX73_019310	0.47	-0.6
4,212,413	+		TX73_019310	0.50	-0.8
4,212,436	-		TX73_019310	0.51	-0.7
4,212,449	+		TX73_019310	0.52	+1.8
4,212,509	+		TX73_019310	0.55	-0.7
4,212,517	-		TX73_019310	0.55	+0.0
4,212,517	-		TX73_019310	0.55	-1.7
4,212,524	+		TX73_019310	0.55	-0.6
4,212,595	-		TX73_019310	0.59	+1.0
4,212,604	+		TX73_019310	0.59	-0.4
4,212,658	-		TX73_019310	0.62	-1.4
4,212,675	+		TX73_019310	0.63	+0.3
4,212,675	+		TX73_019310	0.63	-1.9
4,212,683	-		TX73_019310	0.63	+0.6
4,212,698	-		TX73_019310	0.64	+0.4
4,212,702	+		TX73_019310	0.64	-0.1
4,212,716	-		TX73_019310	0.65	-1.7
4,212,728	+		TX73_019310	0.66	+0.3
4,212,731	-		TX73_019310	0.66	+0.1
4,212,785	+		TX73_019310	0.68	+1.0
4,212,785	+		TX73_019310	0.68	+0.6
4,212,790	+		TX73_019310	0.69	-0.4
4,212,818	+		TX73_019310	0.70	-0.1
4,212,837	+		TX73_019310	0.71	-1.4
4,212,863	-		TX73_019310	0.72	+0.0
4,212,965	-		TX73_019310	0.77	-0.4
4,212,975	-		TX73_019310	0.78	-0.0
4,213,020	-		TX73_019310	0.80	-0.6
4,213,020	-		TX73_019310	0.80	+1.4
4,213,038	-		TX73_019310	0.81	-0.9
4,213,059	+		TX73_019310	0.82	-0.4
4,213,067	-		TX73_019310	0.82	+0.8
4,213,115	+		TX73_019310	0.85	-1.9
4,213,201	-		TX73_019310	0.89	-0.9
4,213,201	-		TX73_019310	0.89	-0.4
4,213,203	-		TX73_019310	0.89	-0.1
4,213,262	+				-0.6
4,213,297	+				-0.1
4,213,301	-				+1.1
4,213,303	+				-1.0
4,213,305	-				-0.1
4,213,337	+				+1.4
4,213,337	+				+0.9
4,213,404	-				-0.1
4,213,423	-				-0.9
4,213,430	+				+1.0
4,213,473	+				-0.6
4,213,473	+				-1.8
4,213,474	+				+0.8
4,213,529	-				+0.9
4,213,543	+				-0.3
4,213,543	+				+1.1
4,213,551	-				-1.7
4,213,551	-				+0.4
4,213,675	-				-0.3
4,213,702	+				-0.1
4,213,717	+				-0.2
4,213,718	+				+0.9
4,213,726	-				-0.3
4,213,774	+				-0.7
4,213,777	-				-0.1
4,213,818	-		TX73_019315	0.12	-0.4
4,213,893	-		TX73_019315	0.18	+0.1
4,213,913	-		TX73_019315	0.20	+0.3
4,213,943	-		TX73_019315	0.22	-0.3
4,213,994	-		TX73_019315	0.27	+0.3
4,214,011	-		TX73_019315	0.28	+0.6
4,214,047	+		TX73_019315	0.31	+0.1
4,214,060	+		TX73_019315	0.32	-1.0
4,214,060	+		TX73_019315	0.32	-0.4
4,214,063	-		TX73_019315	0.32	+0.3
4,214,063	-		TX73_019315	0.32	-0.1
4,214,070	+		TX73_019315	0.33	-0.6
4,214,075	+		TX73_019315	0.34	-0.3
4,214,078	-		TX73_019315	0.34	-1.2
4,214,158	+		TX73_019315	0.41	-0.8
4,214,158	+		TX73_019315	0.41	+0.2
4,214,171	-		TX73_019315	0.42	-0.4
4,214,178	+		TX73_019315	0.42	-0.3
4,214,181	-		TX73_019315	0.43	-0.5
4,214,181	-		TX73_019315	0.43	+0.4
4,214,203	-		TX73_019315	0.44	-0.4
4,214,203	-		TX73_019315	0.44	-0.0
4,214,255	-		TX73_019315	0.49	-0.4
4,214,305	+		TX73_019315	0.53	+0.2
4,214,305	+		TX73_019315	0.53	-1.0
4,214,313	-		TX73_019315	0.54	-1.3
4,214,358	+		TX73_019315	0.58	-1.0
4,214,358	+		TX73_019315	0.58	-0.7
4,214,358	+		TX73_019315	0.58	-0.2
4,214,358	+		TX73_019315	0.58	-0.4
4,214,366	-		TX73_019315	0.58	-0.6
4,214,366	-		TX73_019315	0.58	-0.6
4,214,373	+		TX73_019315	0.59	+0.1
4,214,394	-		TX73_019315	0.61	-0.4
4,214,394	-		TX73_019315	0.61	-0.1