Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_005435

Experiment: starvation expt 1; 14 days; outgrowth in CAAc

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	starvation expt 1; 14 days; outgrowth in CAAc
1,165,235	-		TX73_005430	0.12	-0.1
1,165,245	-		TX73_005430	0.13	-0.6
1,165,256	+		TX73_005430	0.14	+0.5
1,165,256	+		TX73_005430	0.14	+0.4
1,165,274	-		TX73_005430	0.16	+0.3
1,165,276	-		TX73_005430	0.16	-0.5
1,165,300	-		TX73_005430	0.19	-0.4
1,165,320	+		TX73_005430	0.21	+0.1
1,165,330	+		TX73_005430	0.22	-1.1
1,165,330	+		TX73_005430	0.22	-1.6
1,165,330	+		TX73_005430	0.22	-0.3
1,165,330	+		TX73_005430	0.22	-0.1
1,165,330	+		TX73_005430	0.22	-0.8
1,165,330	+		TX73_005430	0.22	-0.2
1,165,338	-		TX73_005430	0.22	+0.6
1,165,338	-		TX73_005430	0.22	+0.7
1,165,338	-		TX73_005430	0.22	-0.6
1,165,364	+		TX73_005430	0.25	-0.7
1,165,372	+		TX73_005430	0.26	-1.4
1,165,389	+		TX73_005430	0.28	-0.4
1,165,395	+		TX73_005430	0.28	-1.2
1,165,396	+		TX73_005430	0.28	-0.7
1,165,397	-		TX73_005430	0.28	-0.0
1,165,397	-		TX73_005430	0.28	+1.1
1,165,403	-		TX73_005430	0.29	+0.3
1,165,404	-		TX73_005430	0.29	-0.4
1,165,423	+		TX73_005430	0.31	-0.3
1,165,434	+		TX73_005430	0.32	+1.3
1,165,434	+		TX73_005430	0.32	+0.5
1,165,467	+		TX73_005430	0.35	-0.1
1,165,467	+		TX73_005430	0.35	+0.7
1,165,524	-		TX73_005430	0.41	+0.7
1,165,539	+		TX73_005430	0.43	+1.2
1,165,544	+		TX73_005430	0.43	+0.5
1,165,547	-		TX73_005430	0.44	+0.2
1,165,564	-		TX73_005430	0.45	+0.7
1,165,575	+		TX73_005430	0.46	-0.3
1,165,576	+		TX73_005430	0.47	-1.6
1,165,584	-		TX73_005430	0.47	-0.6
1,165,626	+		TX73_005430	0.52	-0.1
1,165,643	-		TX73_005430	0.53	+0.0
1,165,645	-		TX73_005430	0.53	-0.2
1,165,667	+		TX73_005430	0.56	+0.6
1,165,677	+		TX73_005430	0.57	+1.0
1,165,692	+		TX73_005430	0.58	+0.8
1,165,700	-		TX73_005430	0.59	+0.1
1,165,701	+		TX73_005430	0.59	+0.3
1,165,723	+		TX73_005430	0.61	-0.6
1,165,732	+		TX73_005430	0.62	+0.1
1,165,737	+		TX73_005430	0.63	-0.3
1,165,749	+		TX73_005430	0.64	+0.7
1,165,763	+		TX73_005430	0.65	-0.4
1,165,781	+		TX73_005430	0.67	+0.4
1,165,808	-		TX73_005430	0.70	-0.7
1,165,808	-		TX73_005430	0.70	-1.9
1,165,808	-		TX73_005430	0.70	+0.5
1,165,808	-		TX73_005430	0.70	-0.1
1,165,812	+		TX73_005430	0.70	-0.2
1,165,845	-		TX73_005430	0.74	+0.5
1,165,880	+		TX73_005430	0.77	+0.2
1,165,912	-		TX73_005430	0.81	-2.6
1,165,912	-		TX73_005430	0.81	-2.1
1,165,961	+		TX73_005430	0.86	-0.3
1,165,961	+		TX73_005430	0.86	-1.1
1,165,971	+		TX73_005430	0.87	+0.2
1,166,056	+				-0.5
1,166,056	-				-0.4
1,166,178	+				-0.6
1,166,202	+				-0.1
1,166,202	+				-0.1
1,166,208	+				+0.9
1,166,280	-		TX73_005435	0.11	-2.0
1,166,304	+		TX73_005435	0.15	-0.2
1,166,322	+		TX73_005435	0.18	+0.4
1,166,326	+		TX73_005435	0.19	+1.8
1,166,365	+		TX73_005435	0.26	-2.7
1,166,372	+		TX73_005435	0.27	-0.3
1,166,390	-		TX73_005435	0.30	-1.2
1,166,397	-		TX73_005435	0.31	-1.3
1,166,419	+		TX73_005435	0.35	+0.1
1,166,450	+		TX73_005435	0.41	-3.5
1,166,474	-		TX73_005435	0.45	-1.7
1,166,510	-		TX73_005435	0.51	-1.7
1,166,513	+		TX73_005435	0.52	+0.4
1,166,513	+		TX73_005435	0.52	-0.6
1,166,513	+		TX73_005435	0.52	+0.1
1,166,513	+		TX73_005435	0.52	+0.2
1,166,513	+		TX73_005435	0.52	-1.9
1,166,521	-		TX73_005435	0.53	-0.2
1,166,523	+		TX73_005435	0.54	-1.9
1,166,528	+		TX73_005435	0.54	-1.7
1,166,533	+		TX73_005435	0.55	-1.6
1,166,536	-		TX73_005435	0.56	-1.4
1,166,557	+		TX73_005435	0.59	-1.0
1,166,563	+		TX73_005435	0.61	+0.7
1,166,565	-		TX73_005435	0.61	-1.9
1,166,571	-		TX73_005435	0.62	-0.7
1,166,571	-		TX73_005435	0.62	-0.2
1,166,621	+		TX73_005435	0.71	-0.1
1,166,638	+		TX73_005435	0.74	-0.7
1,166,638	+		TX73_005435	0.74	-2.2
1,166,638	+		TX73_005435	0.74	-0.4
1,166,641	-		TX73_005435	0.74	-0.3
1,166,641	-		TX73_005435	0.74	-1.4
1,166,668	+		TX73_005435	0.79	-0.9
1,166,692	+		TX73_005435	0.83	-1.0
1,166,692	-		TX73_005435	0.83	-2.8
1,166,722	+		TX73_005435	0.88	-0.2
1,166,740	-				+0.2
1,166,742	+				+1.4
1,166,742	+				+1.8
1,166,742	+				-0.7
1,166,748	+				+0.3
1,166,748	+				+0.6
1,166,748	+				+0.4
1,166,748	+				+1.4
1,166,759	+				-0.3
1,166,759	+				-1.0
1,166,759	+				-0.2
1,166,764	+				-1.4
1,166,764	+				-0.9
1,166,767	-				-0.4
1,166,774	+				-0.2
1,166,774	+				+0.5
1,166,781	+				-0.1
1,166,782	+				-0.1
1,166,795	-				-0.2
1,166,810	-				+0.2
1,166,823	-				-0.1
1,166,872	-				+1.0
1,166,919	+				-0.6
1,166,931	+				-0.9
1,166,931	+				+0.2
1,166,931	+				+0.1
1,166,933	+				-1.2
1,166,941	-				+0.2
1,166,955	+				+0.5
1,166,955	-				-1.4
1,166,963	-				+0.7
1,166,968	+				+1.0
1,166,976	-				-0.3
1,167,043	+				-0.6
1,167,043	+				+0.1
1,167,046	-				-0.1
1,167,046	-				+0.0
1,167,064	-				+0.7
1,167,064	-				+0.6
1,167,083	+				-0.1
1,167,099	+				+0.0
1,167,111	+				-1.6
1,167,119	+				-0.2
1,167,119	+				-0.1
1,167,149	-				+0.6
1,167,156	-				+0.2
1,167,167	+				-0.0
1,167,175	-				-0.3
1,167,240	-				-0.1
1,167,291	+				+0.0
1,167,291	+				+0.0
1,167,299	-				-1.1
1,167,299	-				+0.7
1,167,336	+				+0.9
1,167,348	+				-0.7
1,167,357	+				+0.3
1,167,377	+				+0.8
1,167,390	-				+0.4
1,167,395	+				+0.1
1,167,400	-				+0.0
1,167,401	-				+0.1
1,167,403	-				+0.4
1,167,403	-				+1.5
1,167,403	-				+0.6
1,167,403	-				+0.0
1,167,426	+		TX73_005440	0.11	+0.4
1,167,455	-		TX73_005440	0.14	-2.3
1,167,468	+		TX73_005440	0.15	+0.5
1,167,468	+		TX73_005440	0.15	-1.1
1,167,470	+		TX73_005440	0.15	+0.1
1,167,476	-		TX73_005440	0.16	+0.4
1,167,500	+		TX73_005440	0.18	+0.8
1,167,500	+		TX73_005440	0.18	-0.6
1,167,501	+		TX73_005440	0.18	+0.3
1,167,503	-		TX73_005440	0.19	-1.0
1,167,521	+		TX73_005440	0.20	+0.2
1,167,526	+		TX73_005440	0.21	-0.5
1,167,537	+		TX73_005440	0.22	-0.5
1,167,572	-		TX73_005440	0.25	-0.0
1,167,594	-		TX73_005440	0.28	-0.3
1,167,607	+		TX73_005440	0.29	+1.7
1,167,608	-		TX73_005440	0.29	+0.5
1,167,618	+		TX73_005440	0.30	+0.9
1,167,620	-		TX73_005440	0.30	-1.1
1,167,625	-		TX73_005440	0.31	-0.1
1,167,659	+		TX73_005440	0.34	-1.3
1,167,659	+		TX73_005440	0.34	+0.3
1,167,659	+		TX73_005440	0.34	-0.8
1,167,667	-		TX73_005440	0.35	-0.1
1,167,701	-		TX73_005440	0.38	+0.2
1,167,702	+		TX73_005440	0.38	-0.8
1,167,725	+		TX73_005440	0.40	+0.4
1,167,740	+		TX73_005440	0.42	+0.1
1,167,779	+		TX73_005440	0.46	+0.3
1,167,787	-		TX73_005440	0.46	+0.4