Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_015775

Experiment: starvation expt 2; 7 days; outgrowth in CAAc

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	starvation expt 2; 7 days; outgrowth in CAAc
3,451,852	-		TX73_015770	0.62	-2.4
3,451,885	-		TX73_015770	0.63	-2.3
3,451,888	+		TX73_015770	0.64	-2.7
3,451,896	-		TX73_015770	0.64	-3.8
3,451,896	-		TX73_015770	0.64	-2.1
3,451,896	-		TX73_015770	0.64	-1.8
3,451,900	+		TX73_015770	0.64	-2.0
3,451,908	+		TX73_015770	0.64	-4.1
3,451,917	-		TX73_015770	0.65	-2.0
3,451,941	+		TX73_015770	0.66	-2.6
3,451,958	-		TX73_015770	0.67	-3.7
3,451,964	-		TX73_015770	0.67	-1.9
3,451,969	+		TX73_015770	0.67	-1.5
3,451,970	-		TX73_015770	0.67	-1.8
3,451,970	-		TX73_015770	0.67	-3.3
3,451,977	-		TX73_015770	0.68	-2.1
3,452,021	+		TX73_015770	0.70	-2.3
3,452,029	-		TX73_015770	0.70	-0.7
3,452,034	+		TX73_015770	0.70	-4.5
3,452,044	+		TX73_015770	0.71	-2.9
3,452,052	-		TX73_015770	0.71	-2.3
3,452,059	+		TX73_015770	0.71	-3.0
3,452,098	+		TX73_015770	0.73	-1.8
3,452,124	+		TX73_015770	0.74	-2.3
3,452,133	+		TX73_015770	0.75	-2.6
3,452,144	+		TX73_015770	0.75	-0.3
3,452,144	+		TX73_015770	0.75	-0.3
3,452,153	-		TX73_015770	0.76	-2.8
3,452,171	-		TX73_015770	0.76	-0.7
3,452,181	+		TX73_015770	0.77	-3.0
3,452,205	+		TX73_015770	0.78	-2.6
3,452,220	-		TX73_015770	0.79	+1.3
3,452,220	-		TX73_015770	0.79	-0.7
3,452,232	+		TX73_015770	0.79	-2.7
3,452,240	-		TX73_015770	0.79	-3.5
3,452,249	-		TX73_015770	0.80	-1.6
3,452,254	+		TX73_015770	0.80	-4.3
3,452,254	+		TX73_015770	0.80	-2.6
3,452,254	+		TX73_015770	0.80	-2.4
3,452,259	+		TX73_015770	0.80	-3.4
3,452,259	+		TX73_015770	0.80	-3.7
3,452,262	-		TX73_015770	0.80	-1.8
3,452,262	-		TX73_015770	0.80	-2.3
3,452,264	+		TX73_015770	0.81	-1.0
3,452,269	+		TX73_015770	0.81	-2.1
3,452,269	+		TX73_015770	0.81	-1.8
3,452,269	+		TX73_015770	0.81	-3.0
3,452,269	+		TX73_015770	0.81	-2.4
3,452,269	+		TX73_015770	0.81	-2.3
3,452,269	+		TX73_015770	0.81	-1.8
3,452,269	+		TX73_015770	0.81	-1.5
3,452,271	-		TX73_015770	0.81	-3.1
3,452,277	-		TX73_015770	0.81	-4.8
3,452,277	-		TX73_015770	0.81	-3.8
3,452,283	-		TX73_015770	0.81	-3.3
3,452,287	-		TX73_015770	0.82	-4.4
3,452,330	+		TX73_015770	0.84	-2.4
3,452,330	+		TX73_015770	0.84	-1.5
3,452,338	-		TX73_015770	0.84	-2.6
3,452,338	-		TX73_015770	0.84	-3.2
3,452,338	-		TX73_015770	0.84	+1.3
3,452,338	-		TX73_015770	0.84	-0.7
3,452,370	-		TX73_015770	0.85	-4.3
3,452,382	+		TX73_015770	0.86	-2.5
3,452,382	+		TX73_015770	0.86	-2.3
3,452,394	-		TX73_015770	0.86	-3.0
3,452,394	-		TX73_015770	0.86	-3.4
3,452,396	+		TX73_015770	0.87	-1.8
3,452,396	+		TX73_015770	0.87	-3.3
3,452,401	+		TX73_015770	0.87	-3.5
3,452,401	+		TX73_015770	0.87	-3.9
3,452,404	-		TX73_015770	0.87	-2.7
3,452,404	-		TX73_015770	0.87	-0.3
3,452,404	-		TX73_015770	0.87	-2.0
3,452,405	+		TX73_015770	0.87	-4.1
3,452,405	+		TX73_015770	0.87	-3.6
3,452,406	+		TX73_015770	0.87	-3.0
3,452,406	+		TX73_015770	0.87	-2.7
3,452,411	+		TX73_015770	0.87	-3.3
3,452,412	-		TX73_015770	0.87	-1.4
3,452,413	-		TX73_015770	0.87	-3.6
3,452,414	+		TX73_015770	0.87	-2.5
3,452,414	-		TX73_015770	0.87	-0.9
3,452,424	+		TX73_015770	0.88	-2.3
3,452,431	+		TX73_015770	0.88	-3.9
3,452,437	-		TX73_015770	0.88	-2.9
3,452,453	-		TX73_015770	0.89	-3.1
3,452,491	+				-2.8
3,452,526	+				-3.8
3,452,526	+				-3.3
3,452,526	+				-3.3
3,452,539	-				-3.4
3,452,539	-				-2.6
3,452,592	-				-1.9
3,452,592	-				-2.8
3,452,681	+				-1.0
3,452,708	+				-0.0
3,452,713	+				-0.6
3,452,713	+				+0.9
3,452,721	-				+0.4
3,452,728	+				+0.3
3,452,752	-				+0.7
3,452,825	-				-0.0
3,452,827	+				+0.5
3,452,843	-				-0.1
3,452,846	+				+1.3
3,452,869	-				-1.0
3,453,515	+				+0.0
3,453,516	-				-0.7
3,453,517	+				+0.0
3,453,525	-				+0.9
3,453,525	-				+1.2
3,453,563	+				+0.2
3,453,563	+				+0.3
3,453,569	+				+0.2
3,453,571	-				-0.2
3,453,571	-				-0.5
3,453,576	-				+1.0
3,453,577	-				+0.8
3,453,583	+				-1.0
3,453,605	+				+1.6
3,453,613	-				-0.6
3,453,633	+		TX73_015780	0.13	+0.8
3,453,633	+		TX73_015780	0.13	+0.0
3,453,641	-		TX73_015780	0.14	-0.1
3,453,641	-		TX73_015780	0.14	+0.7
3,453,641	-		TX73_015780	0.14	-0.3
3,453,641	-		TX73_015780	0.14	+1.3
3,453,641	-		TX73_015780	0.14	-0.3
3,453,659	+		TX73_015780	0.17	-0.0
3,453,665	+		TX73_015780	0.18	+0.2
3,453,666	+		TX73_015780	0.19	-0.3
3,453,666	+		TX73_015780	0.19	-0.6
3,453,673	-		TX73_015780	0.20	+0.3
3,453,674	-		TX73_015780	0.20	+0.6
3,453,674	-		TX73_015780	0.20	-0.4
3,453,703	+		TX73_015780	0.25	-0.2
3,453,711	-		TX73_015780	0.27	+0.3
3,453,711	-		TX73_015780	0.27	-2.8
3,453,711	-		TX73_015780	0.27	-0.5
3,453,711	-		TX73_015780	0.27	-0.5
3,453,741	+		TX73_015780	0.32	-1.1
3,453,741	+		TX73_015780	0.32	-1.8
3,453,746	+		TX73_015780	0.33	+0.5
3,453,791	+		TX73_015780	0.42	+1.7
3,453,799	-		TX73_015780	0.43	-0.1
3,453,825	-		TX73_015780	0.48	+1.3
3,453,825	-		TX73_015780	0.48	+0.6
3,453,826	-		TX73_015780	0.48	+0.6
3,453,836	+		TX73_015780	0.50	-0.7
3,453,836	+		TX73_015780	0.50	+1.6
3,453,844	-		TX73_015780	0.51	+0.8
3,453,845	+		TX73_015780	0.51	-0.7
3,453,853	-		TX73_015780	0.53	+0.6
3,453,853	-		TX73_015780	0.53	-1.8
3,453,855	+		TX73_015780	0.53	-0.0
3,453,876	+		TX73_015780	0.57	-0.0
3,453,876	-		TX73_015780	0.57	-0.2
3,453,883	-		TX73_015780	0.58	-1.0
3,453,885	+		TX73_015780	0.59	+1.0
3,453,900	+		TX73_015780	0.62	-0.3
3,453,900	-		TX73_015780	0.62	-1.1
3,453,908	-		TX73_015780	0.63	-0.0
3,453,922	+		TX73_015780	0.66	-0.4
3,453,922	+		TX73_015780	0.66	+0.0
3,453,930	-		TX73_015780	0.67	-1.0
3,453,988	+		TX73_015780	0.78	+0.6
3,454,007	-		TX73_015780	0.81	-0.1
3,454,011	-		TX73_015780	0.82	+1.0
3,454,043	+		TX73_015780	0.88	-0.3
3,454,053	+		TX73_015780	0.90	+0.3
3,454,072	-				+0.3
3,454,073	-				-1.4
3,454,094	+				+0.9
3,454,115	+				-0.4
3,454,164	-				+0.5
3,454,183	+				-1.4
3,454,188	+				-0.0
3,454,191	-				-0.1
3,454,195	-				+1.7
3,454,212	+				+0.4
3,454,220	-				-0.0
3,454,224	+				-0.5
3,454,244	+				+0.3
3,454,244	+				-0.5
3,454,252	-				-1.0
3,454,282	+				-0.2
3,454,309	-				+0.1
3,454,318	+				-0.9
3,454,329	-				-2.5