Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_016340

Experiment: starvation expt 4; 3 days; outgrowth in CAAc

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	starvation expt 4; 3 days; outgrowth in CAAc
3,566,579	-		TX73_016330	0.13	-0.4
3,566,581	+		TX73_016330	0.13	-0.2
3,566,581	+		TX73_016330	0.13	+0.0
3,566,586	+		TX73_016330	0.14	-1.0
3,566,586	+		TX73_016330	0.14	-0.7
3,566,586	+		TX73_016330	0.14	-2.0
3,566,586	+		TX73_016330	0.14	-1.3
3,566,586	+		TX73_016330	0.14	+0.3
3,566,586	+		TX73_016330	0.14	+0.0
3,566,589	-		TX73_016330	0.14	+0.0
3,566,594	-		TX73_016330	0.15	+0.2
3,566,605	+		TX73_016330	0.17	+0.0
3,566,605	+		TX73_016330	0.17	-0.9
3,566,609	+		TX73_016330	0.17	-0.4
3,566,613	-		TX73_016330	0.18	+0.3
3,566,613	-		TX73_016330	0.18	+0.6
3,566,613	-		TX73_016330	0.18	+0.7
3,566,613	-		TX73_016330	0.18	+0.6
3,566,639	+		TX73_016330	0.22	-0.1
3,566,644	-		TX73_016330	0.23	+1.0
3,566,647	-		TX73_016330	0.23	-0.2
3,566,667	+		TX73_016330	0.26	-0.3
3,566,686	+		TX73_016330	0.29	+0.2
3,566,686	+		TX73_016330	0.29	+0.3
3,566,692	+		TX73_016330	0.30	-0.4
3,566,699	-		TX73_016330	0.31	+0.1
3,566,713	+		TX73_016330	0.33	+0.8
3,566,721	-		TX73_016330	0.34	-0.1
3,566,732	+		TX73_016330	0.36	-0.7
3,566,741	-		TX73_016330	0.37	+0.6
3,566,766	+		TX73_016330	0.41	+0.2
3,566,774	-		TX73_016330	0.42	+1.3
3,566,774	-		TX73_016330	0.42	-0.8
3,566,776	+		TX73_016330	0.43	+0.1
3,566,822	-		TX73_016330	0.50	+0.3
3,566,892	+		TX73_016330	0.60	-0.2
3,566,892	+		TX73_016330	0.60	+0.2
3,566,897	+		TX73_016330	0.61	+0.4
3,566,897	+		TX73_016330	0.61	-0.0
3,566,897	+		TX73_016330	0.61	-0.1
3,566,900	-		TX73_016330	0.62	-0.8
3,566,900	-		TX73_016330	0.62	-0.4
3,566,900	-		TX73_016330	0.62	-1.3
3,566,900	-		TX73_016330	0.62	+0.2
3,566,905	-		TX73_016330	0.62	-0.2
3,566,905	-		TX73_016330	0.62	-0.7
3,566,915	+		TX73_016330	0.64	-0.8
3,566,935	-		TX73_016330	0.67	+0.1
3,566,977	+		TX73_016330	0.73	+0.3
3,566,979	+		TX73_016330	0.74	-0.5
3,567,006	-		TX73_016330	0.78	+0.8
3,567,033	+		TX73_016330	0.82	+0.4
3,567,035	+		TX73_016330	0.82	-0.4
3,567,043	-		TX73_016330	0.83	+0.8
3,567,044	-		TX73_016330	0.84	-0.4
3,567,047	+		TX73_016330	0.84	+0.6
3,567,054	-		TX73_016330	0.85	-1.4
3,567,090	+				-0.0
3,567,098	-				+0.1
3,567,146	+				-0.2
3,567,163	+				+0.4
3,567,165	+				+0.5
3,567,200	+				-0.4
3,567,239	-				+0.2
3,567,239	-				+0.3
3,567,239	-				+0.4
3,567,246	+				-1.9
3,567,261	+				-0.5
3,567,267	+				+0.1
3,567,275	-				-1.3
3,567,292	+				-1.4
3,567,325	-		TX73_016335	0.20	-0.4
3,567,338	+		TX73_016335	0.24	+0.1
3,567,343	+		TX73_016335	0.26	+0.4
3,567,343	+		TX73_016335	0.26	+1.6
3,567,343	+		TX73_016335	0.26	-0.8
3,567,346	-		TX73_016335	0.27	-1.4
3,567,353	+		TX73_016335	0.29	-0.8
3,567,356	-		TX73_016335	0.31	-0.3
3,567,384	+		TX73_016335	0.40	-0.7
3,567,386	+		TX73_016335	0.41	+0.3
3,567,386	+		TX73_016335	0.41	-1.4
3,567,454	+		TX73_016335	0.65	-0.3
3,567,460	+		TX73_016335	0.67	+0.9
3,567,519	+		TX73_016335	0.88	-0.6
3,567,521	+		TX73_016335	0.88	-1.3
3,567,521	+		TX73_016335	0.88	-1.6
3,567,521	+		TX73_016335	0.88	-0.1
3,567,531	-				+1.1
3,567,550	-				+0.3
3,567,555	-				+0.2
3,567,557	-				-0.1
3,567,605	+				-0.1
3,567,623	+				-0.5
3,567,657	+		TX73_016340	0.12	-1.0
3,567,738	-		TX73_016340	0.22	+0.2
3,567,761	-		TX73_016340	0.25	-0.6
3,567,877	+		TX73_016340	0.40	+0.5
3,567,897	+		TX73_016340	0.42	-0.5
3,567,908	+		TX73_016340	0.44	+0.2
3,567,952	+		TX73_016340	0.49	+0.1
3,567,974	+		TX73_016340	0.52	-0.4
3,567,984	+		TX73_016340	0.53	-0.1
3,567,999	-		TX73_016340	0.55	-0.9
3,567,999	-		TX73_016340	0.55	-0.9
3,567,999	-		TX73_016340	0.55	+0.6
3,568,078	+		TX73_016340	0.65	-0.8
3,568,078	+		TX73_016340	0.65	+0.1
3,568,078	+		TX73_016340	0.65	-0.7
3,568,084	-		TX73_016340	0.66	+0.1
3,568,084	-		TX73_016340	0.66	+0.1
3,568,084	-		TX73_016340	0.66	+0.1
3,568,086	-		TX73_016340	0.66	-0.3
3,568,087	+		TX73_016340	0.66	-0.2
3,568,132	+		TX73_016340	0.72	-0.1
3,568,133	-		TX73_016340	0.72	+0.5
3,568,134	-		TX73_016340	0.72	+0.5
3,568,160	-		TX73_016340	0.75	-0.5
3,568,235	+		TX73_016340	0.85	+0.3
3,568,235	+		TX73_016340	0.85	-0.6
3,568,284	+				-0.4
3,568,284	+				-0.1
3,568,292	-				-0.3
3,568,310	-				-0.1
3,568,332	+				-0.8
3,568,342	+				-1.5
3,568,392	+				-0.2
3,568,413	-				-0.4
3,568,418	-				-0.5
3,568,432	+				-1.3
3,568,440	-				-0.5
3,568,440	-				+0.9
3,568,440	-				+1.9
3,568,445	-				-1.0
3,568,500	+				-0.1
3,568,548	-		TX73_016345	0.14	-1.7
3,568,559	+		TX73_016345	0.16	-0.2
3,568,605	+		TX73_016345	0.21	-0.7
3,568,610	+		TX73_016345	0.22	+0.4
3,568,618	-		TX73_016345	0.23	+0.5
3,568,618	-		TX73_016345	0.23	+0.5
3,568,628	+		TX73_016345	0.24	-1.2
3,568,636	-		TX73_016345	0.25	+0.4
3,568,654	+		TX73_016345	0.27	-0.9
3,568,662	-		TX73_016345	0.28	-0.9
3,568,662	-		TX73_016345	0.28	-0.3
3,568,669	+		TX73_016345	0.29	+0.0
3,568,669	+		TX73_016345	0.29	-0.2
3,568,703	-		TX73_016345	0.33	+0.0
3,568,705	+		TX73_016345	0.33	-0.6
3,568,718	-		TX73_016345	0.35	+0.4
3,568,723	-		TX73_016345	0.35	-2.1
3,568,732	+		TX73_016345	0.36	-0.1
3,568,781	+		TX73_016345	0.42	-0.1
3,568,794	+		TX73_016345	0.44	+0.6
3,568,794	+		TX73_016345	0.44	-0.9
3,568,794	+		TX73_016345	0.44	-2.0
3,568,832	+		TX73_016345	0.48	-0.4
3,568,868	-		TX73_016345	0.53	+1.7
3,568,874	+		TX73_016345	0.53	-0.5
3,568,933	+		TX73_016345	0.60	-0.0
3,568,933	+		TX73_016345	0.60	-0.1
3,568,977	+		TX73_016345	0.66	+0.5
3,568,981	+		TX73_016345	0.66	+0.3
3,568,981	+		TX73_016345	0.66	-1.5
3,568,981	+		TX73_016345	0.66	-0.5
3,568,983	+		TX73_016345	0.66	-1.0
3,568,989	-		TX73_016345	0.67	+0.7
3,568,989	-		TX73_016345	0.67	+0.2
3,569,008	-		TX73_016345	0.69	-0.6
3,569,024	+		TX73_016345	0.71	+0.2
3,569,032	-		TX73_016345	0.72	-0.2
3,569,032	-		TX73_016345	0.72	-0.3
3,569,039	-		TX73_016345	0.73	-0.4
3,569,039	-		TX73_016345	0.73	-0.7
3,569,057	+		TX73_016345	0.75	+0.3
3,569,085	+		TX73_016345	0.79	+0.5
3,569,110	+		TX73_016345	0.82	-0.0
3,569,112	-		TX73_016345	0.82	-0.3
3,569,139	-		TX73_016345	0.85	+0.3
3,569,166	+		TX73_016345	0.88	-0.3
3,569,173	+		TX73_016345	0.89	-0.7
3,569,187	+				+0.1
3,569,217	+				-0.1
3,569,218	-				+0.5
3,569,224	+				+1.7
3,569,230	+				-0.3
3,569,240	-				+0.0
3,569,257	-				-1.6
3,569,259	+				-0.4
3,569,295	+				-0.6
3,569,305	+				-0.8
3,569,313	-				-0.7