Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024115

Experiment: starvation outgrowth control in CAAc

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntTX73_024110 and TX73_024115 are separated by 34 nucleotidesTX73_024115 and TX73_024120 are separated by 37 nucleotides TX73_024110: TX73_024110 - transketolase, at 5,226,784 to 5,228,799 _024110 TX73_024115: TX73_024115 - phosphoribulokinase, at 5,228,834 to 5,229,709 _024115 TX73_024120: TX73_024120 - class 1 fructose-bisphosphatase, at 5,229,747 to 5,230,778 _024120 Position (kb) 5228 5229 5230Strain fitness (log2 ratio) -1 0 1at 5228.815 kb on - strandat 5228.839 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction starvation outgrowth control in CAAc
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5,228,815 - -0.0
5,228,839 - -1.2

Or see this region's nucleotide sequence