Experiment: Lactate-Thiosulfate (15mM) minimal (MOLThioS4)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2043 and DVU2044 are separated by 108 nucleotides DVU2044 and DVU2045 overlap by 8 nucleotides DVU2045 and DVU2046 are separated by 139 nucleotides DVU2046 and DORF15206 overlap by 16 nucleotides
DVU2043: DVU2043 - conserved hypothetical protein (TIGR), at 2,120,862 to 2,122,463
DVU2043
DVU2044: DVU2044 - hypothetical protein (TIGR), at 2,122,572 to 2,122,697
DVU2044
DVU2045: DVU2045 - hypothetical protein (TIGR), at 2,122,690 to 2,122,872
DVU2045
DVU2046: DVU2046 - hypothetical protein (TIGR), at 2,123,012 to 2,123,182
DVU2046
DORF15206: DORF15206 - no description, at 2,123,167 to 2,125,602
DORF15206
Position (kb)
2122
2123 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2121.641 kb on + strand, within DVU2043 at 2121.641 kb on + strand, within DVU2043 at 2121.651 kb on - strand, within DVU2043 at 2121.742 kb on - strand, within DVU2043 at 2121.801 kb on - strand, within DVU2043 at 2121.860 kb on + strand, within DVU2043 at 2121.887 kb on + strand, within DVU2043 at 2121.957 kb on + strand, within DVU2043 at 2121.957 kb on + strand, within DVU2043 at 2122.006 kb on - strand, within DVU2043 at 2122.006 kb on - strand, within DVU2043 at 2122.022 kb on + strand, within DVU2043 at 2122.110 kb on + strand, within DVU2043 at 2122.110 kb on - strand, within DVU2043 at 2122.119 kb on + strand, within DVU2043 at 2122.211 kb on - strand, within DVU2043 at 2122.223 kb on - strand, within DVU2043 at 2122.306 kb on + strand at 2122.424 kb on + strand at 2122.424 kb on + strand at 2122.483 kb on + strand at 2122.491 kb on - strand at 2122.526 kb on - strand at 2122.532 kb on - strand at 2122.537 kb on - strand at 2122.641 kb on - strand, within DVU2044 at 2122.659 kb on + strand, within DVU2044 at 2122.694 kb on - strand at 2122.711 kb on + strand, within DVU2045 at 2122.860 kb on - strand at 2122.864 kb on + strand at 2122.889 kb on + strand at 2122.900 kb on + strand at 2123.086 kb on - strand, within DVU2046 at 2123.164 kb on + strand, within DVU2046 at 2123.172 kb on - strand at 2123.336 kb on - strand at 2123.399 kb on - strand at 2123.408 kb on + strand at 2123.463 kb on - strand, within DORF15206 at 2123.463 kb on - strand, within DORF15206 at 2123.472 kb on + strand, within DORF15206 at 2123.536 kb on - strand, within DORF15206 at 2123.536 kb on - strand, within DORF15206 at 2123.536 kb on - strand, within DORF15206 at 2123.536 kb on - strand, within DORF15206 at 2123.605 kb on - strand, within DORF15206 at 2123.690 kb on + strand, within DORF15206
Per-strain Table
Position Strand Gene LocusTag Fraction Lactate-Thiosulfate (15mM) minimal (MOLThioS4) remove 2,121,641 + DVU2043 0.49 -0.0 2,121,641 + DVU2043 0.49 -1.0 2,121,651 - DVU2043 0.49 +1.4 2,121,742 - DVU2043 0.55 +1.0 2,121,801 - DVU2043 0.59 -1.2 2,121,860 + DVU2043 0.62 -0.0 2,121,887 + DVU2043 0.64 +0.1 2,121,957 + DVU2043 0.68 +0.6 2,121,957 + DVU2043 0.68 +0.2 2,122,006 - DVU2043 0.71 +0.5 2,122,006 - DVU2043 0.71 +0.4 2,122,022 + DVU2043 0.72 +0.3 2,122,110 + DVU2043 0.78 -0.1 2,122,110 - DVU2043 0.78 +0.3 2,122,119 + DVU2043 0.78 -0.5 2,122,211 - DVU2043 0.84 -0.4 2,122,223 - DVU2043 0.85 +0.0 2,122,306 + -0.8 2,122,424 + -1.0 2,122,424 + -0.2 2,122,483 + -0.4 2,122,491 - -0.2 2,122,526 - -0.4 2,122,532 - +0.1 2,122,537 - -1.0 2,122,641 - DVU2044 0.55 -0.6 2,122,659 + DVU2044 0.69 -1.5 2,122,694 - -1.2 2,122,711 + DVU2045 0.11 +0.5 2,122,860 - -0.4 2,122,864 + +0.2 2,122,889 + +1.6 2,122,900 + -0.4 2,123,086 - DVU2046 0.43 -1.3 2,123,164 + DVU2046 0.89 +0.1 2,123,172 - +0.1 2,123,336 - -0.7 2,123,399 - +1.5 2,123,408 + -1.9 2,123,463 - DORF15206 0.12 +0.7 2,123,463 - DORF15206 0.12 -0.5 2,123,472 + DORF15206 0.13 -1.2 2,123,536 - DORF15206 0.15 +1.0 2,123,536 - DORF15206 0.15 +2.0 2,123,536 - DORF15206 0.15 -2.4 2,123,536 - DORF15206 0.15 -0.1 2,123,605 - DORF15206 0.18 -1.5 2,123,690 + DORF15206 0.21 -0.5
Or see this region's nucleotide sequence