Experiment: MoLS4 without Molybdate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2175 and DVU2176 are separated by 76 nucleotides DVU2176 and DVU2177 are separated by 349 nucleotides
DVU2175: DVU2175 - adenine specific DNA methyltransferase, putative (TIGR), at 2,270,961 to 2,275,748
DVU2175
DVU2176: DVU2176 - hypothetical protein (TIGR), at 2,275,825 to 2,276,004
DVU2176
DVU2177: DVU2177 - hypothetical protein (TIGR), at 2,276,354 to 2,277,667
DVU2177
Position (kb)
2275
2276
2277 Strain fitness (log2 ratio)
-2
-1
0
1 at 2274.893 kb on + strand, within DVU2175 at 2274.925 kb on + strand, within DVU2175 at 2274.933 kb on - strand, within DVU2175 at 2275.138 kb on + strand, within DVU2175 at 2275.138 kb on + strand, within DVU2175 at 2275.146 kb on - strand, within DVU2175 at 2275.152 kb on + strand, within DVU2175 at 2275.159 kb on + strand, within DVU2175 at 2275.160 kb on - strand, within DVU2175 at 2275.188 kb on - strand, within DVU2175 at 2275.188 kb on - strand, within DVU2175 at 2275.227 kb on + strand, within DVU2175 at 2275.239 kb on + strand, within DVU2175 at 2275.263 kb on - strand, within DVU2175 at 2275.284 kb on + strand at 2275.314 kb on + strand at 2275.314 kb on + strand at 2275.314 kb on + strand at 2275.322 kb on - strand at 2275.343 kb on - strand at 2275.381 kb on - strand at 2275.430 kb on + strand at 2275.465 kb on + strand at 2275.553 kb on + strand at 2275.600 kb on + strand at 2275.614 kb on + strand at 2275.622 kb on - strand at 2275.636 kb on + strand at 2275.662 kb on - strand at 2275.725 kb on + strand at 2275.725 kb on + strand at 2275.733 kb on - strand at 2275.883 kb on - strand, within DVU2176 at 2276.184 kb on - strand at 2276.406 kb on + strand at 2276.620 kb on + strand, within DVU2177
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Molybdate remove 2,274,893 + DVU2175 0.82 -0.2 2,274,925 + DVU2175 0.83 -0.1 2,274,933 - DVU2175 0.83 -0.3 2,275,138 + DVU2175 0.87 -0.5 2,275,138 + DVU2175 0.87 -0.4 2,275,146 - DVU2175 0.87 +0.2 2,275,152 + DVU2175 0.88 -0.7 2,275,159 + DVU2175 0.88 -0.6 2,275,160 - DVU2175 0.88 -0.7 2,275,188 - DVU2175 0.88 -0.9 2,275,188 - DVU2175 0.88 -0.6 2,275,227 + DVU2175 0.89 -0.8 2,275,239 + DVU2175 0.89 -1.8 2,275,263 - DVU2175 0.90 -0.2 2,275,284 + -0.2 2,275,314 + +1.1 2,275,314 + -0.7 2,275,314 + -0.7 2,275,322 - -0.3 2,275,343 - +1.2 2,275,381 - -0.6 2,275,430 + -1.1 2,275,465 + +0.5 2,275,553 + -0.1 2,275,600 + +0.4 2,275,614 + -0.2 2,275,622 - -0.2 2,275,636 + -0.5 2,275,662 - +0.1 2,275,725 + -1.0 2,275,725 + +0.0 2,275,733 - -0.9 2,275,883 - DVU2176 0.32 -1.2 2,276,184 - -0.3 2,276,406 + -0.0 2,276,620 + DVU2177 0.20 -0.1
Or see this region's nucleotide sequence