Experiment: MoLS4 without Molybdate/Tungstate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fdnG-2 and DVU2483 are separated by 16 nucleotides DVU2483 and DVU2484 are separated by 26 nucleotides
DVU2482: fdnG-2 - formate dehydrogenase, alpha subunit, selenocysteine-containing (TIGR), at 2,590,064 to 2,593,075
fdnG-2
DVU2483: DVU2483 - cytochrome c family protein (TIGR), at 2,593,092 to 2,594,837
DVU2483
DVU2484: DVU2484 - cytochrome c family protein (TIGR), at 2,594,864 to 2,596,156
DVU2484
Position (kb)
2593
2594
2595 Strain fitness (log2 ratio)
-2
-1
0
1 at 2592.272 kb on - strand, within fdnG-2 at 2592.272 kb on - strand, within fdnG-2 at 2592.334 kb on - strand, within fdnG-2 at 2592.341 kb on + strand, within fdnG-2 at 2592.391 kb on - strand, within fdnG-2 at 2592.498 kb on - strand, within fdnG-2 at 2592.533 kb on - strand, within fdnG-2 at 2592.564 kb on + strand, within fdnG-2 at 2592.607 kb on - strand, within fdnG-2 at 2592.675 kb on + strand, within fdnG-2 at 2592.752 kb on + strand, within fdnG-2 at 2592.752 kb on + strand, within fdnG-2 at 2592.760 kb on - strand, within fdnG-2 at 2592.760 kb on - strand, within fdnG-2 at 2592.760 kb on - strand, within fdnG-2 at 2592.760 kb on - strand, within fdnG-2 at 2592.760 kb on - strand, within fdnG-2 at 2592.771 kb on + strand, within fdnG-2 at 2592.807 kb on + strand at 2592.815 kb on - strand at 2592.852 kb on + strand at 2592.876 kb on + strand at 2592.887 kb on + strand at 2592.942 kb on + strand at 2592.943 kb on - strand at 2592.995 kb on + strand at 2593.144 kb on + strand at 2593.163 kb on + strand at 2593.163 kb on + strand at 2593.171 kb on - strand at 2593.228 kb on - strand at 2593.365 kb on - strand, within DVU2483 at 2593.422 kb on - strand, within DVU2483 at 2593.470 kb on + strand, within DVU2483 at 2593.653 kb on - strand, within DVU2483 at 2593.794 kb on + strand, within DVU2483 at 2593.847 kb on - strand, within DVU2483 at 2593.867 kb on + strand, within DVU2483 at 2593.885 kb on - strand, within DVU2483 at 2593.890 kb on - strand, within DVU2483 at 2593.902 kb on + strand, within DVU2483 at 2593.910 kb on - strand, within DVU2483 at 2593.917 kb on - strand, within DVU2483 at 2594.025 kb on - strand, within DVU2483 at 2594.094 kb on + strand, within DVU2483 at 2594.144 kb on - strand, within DVU2483 at 2594.226 kb on + strand, within DVU2483 at 2594.244 kb on + strand, within DVU2483 at 2594.258 kb on - strand, within DVU2483 at 2594.302 kb on - strand, within DVU2483 at 2594.317 kb on + strand, within DVU2483 at 2594.317 kb on + strand, within DVU2483 at 2594.325 kb on - strand, within DVU2483 at 2594.420 kb on + strand, within DVU2483 at 2594.436 kb on - strand, within DVU2483 at 2594.436 kb on - strand, within DVU2483 at 2594.585 kb on - strand, within DVU2483 at 2594.617 kb on - strand, within DVU2483 at 2594.617 kb on - strand, within DVU2483 at 2594.689 kb on + strand at 2594.821 kb on - strand at 2594.946 kb on + strand at 2594.954 kb on - strand at 2594.961 kb on + strand at 2594.964 kb on - strand at 2595.025 kb on - strand, within DVU2484 at 2595.124 kb on + strand, within DVU2484 at 2595.127 kb on - strand, within DVU2484 at 2595.321 kb on - strand, within DVU2484 at 2595.326 kb on - strand, within DVU2484 at 2595.350 kb on + strand, within DVU2484 at 2595.352 kb on + strand, within DVU2484 at 2595.455 kb on + strand, within DVU2484 at 2595.575 kb on - strand, within DVU2484 at 2595.587 kb on - strand, within DVU2484 at 2595.601 kb on - strand, within DVU2484 at 2595.711 kb on + strand, within DVU2484
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Molybdate/Tungstate remove 2,592,272 - fdnG-2 DVU2482 0.73 +0.1 2,592,272 - fdnG-2 DVU2482 0.73 +0.4 2,592,334 - fdnG-2 DVU2482 0.75 +0.4 2,592,341 + fdnG-2 DVU2482 0.76 -0.2 2,592,391 - fdnG-2 DVU2482 0.77 +0.6 2,592,498 - fdnG-2 DVU2482 0.81 +0.3 2,592,533 - fdnG-2 DVU2482 0.82 +0.4 2,592,564 + fdnG-2 DVU2482 0.83 -0.2 2,592,607 - fdnG-2 DVU2482 0.84 -0.0 2,592,675 + fdnG-2 DVU2482 0.87 -0.9 2,592,752 + fdnG-2 DVU2482 0.89 -0.4 2,592,752 + fdnG-2 DVU2482 0.89 -0.6 2,592,760 - fdnG-2 DVU2482 0.90 +0.2 2,592,760 - fdnG-2 DVU2482 0.90 +0.3 2,592,760 - fdnG-2 DVU2482 0.90 -0.3 2,592,760 - fdnG-2 DVU2482 0.90 -1.4 2,592,760 - fdnG-2 DVU2482 0.90 -0.8 2,592,771 + fdnG-2 DVU2482 0.90 +0.1 2,592,807 + -0.5 2,592,815 - -0.2 2,592,852 + +0.2 2,592,876 + -0.6 2,592,887 + -0.8 2,592,942 + +0.6 2,592,943 - -0.4 2,592,995 + -0.1 2,593,144 + -0.6 2,593,163 + -0.1 2,593,163 + -0.4 2,593,171 - +0.1 2,593,228 - -0.1 2,593,365 - DVU2483 0.16 -0.3 2,593,422 - DVU2483 0.19 -0.7 2,593,470 + DVU2483 0.22 +0.1 2,593,653 - DVU2483 0.32 -0.4 2,593,794 + DVU2483 0.40 -0.6 2,593,847 - DVU2483 0.43 -0.2 2,593,867 + DVU2483 0.44 +0.2 2,593,885 - DVU2483 0.45 -0.5 2,593,890 - DVU2483 0.46 -0.6 2,593,902 + DVU2483 0.46 -0.5 2,593,910 - DVU2483 0.47 +0.4 2,593,917 - DVU2483 0.47 +0.1 2,594,025 - DVU2483 0.53 -0.2 2,594,094 + DVU2483 0.57 -0.5 2,594,144 - DVU2483 0.60 +0.3 2,594,226 + DVU2483 0.65 +0.2 2,594,244 + DVU2483 0.66 +0.4 2,594,258 - DVU2483 0.67 +0.0 2,594,302 - DVU2483 0.69 -0.1 2,594,317 + DVU2483 0.70 -0.2 2,594,317 + DVU2483 0.70 -0.3 2,594,325 - DVU2483 0.71 -2.1 2,594,420 + DVU2483 0.76 -0.1 2,594,436 - DVU2483 0.77 -0.4 2,594,436 - DVU2483 0.77 +0.1 2,594,585 - DVU2483 0.86 +0.5 2,594,617 - DVU2483 0.87 +0.1 2,594,617 - DVU2483 0.87 +0.3 2,594,689 + -0.4 2,594,821 - +0.6 2,594,946 + -1.1 2,594,954 - +0.5 2,594,961 + -0.5 2,594,964 - +0.8 2,595,025 - DVU2484 0.12 +0.0 2,595,124 + DVU2484 0.20 -0.6 2,595,127 - DVU2484 0.20 -0.4 2,595,321 - DVU2484 0.35 -0.3 2,595,326 - DVU2484 0.36 -0.7 2,595,350 + DVU2484 0.38 +1.6 2,595,352 + DVU2484 0.38 -0.4 2,595,455 + DVU2484 0.46 +0.1 2,595,575 - DVU2484 0.55 -0.6 2,595,587 - DVU2484 0.56 +0.3 2,595,601 - DVU2484 0.57 -0.1 2,595,711 + DVU2484 0.66 +0.4
Or see this region's nucleotide sequence