Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0673 and Rv0674 are separated by 2 nucleotides Rv0674 and Rv0675 overlap by 4 nucleotides Rv0675 and Rv0676c are separated by 11 nucleotides
Rv0673: Rv0673 - Possible enoyl-CoA hydratase EchA4 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase), at 773,123 to 774,061
Rv0673
Rv0674: Rv0674 - Conserved hypothetical protein, at 774,064 to 774,786
Rv0674
Rv0675: Rv0675 - Probable enoyl-CoA hydratase EchA5 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase), at 774,783 to 775,574
Rv0675
Rv0676c: Rv0676c - Probable conserved transmembrane transport protein MmpL5, at 775,586 to 778,480
Rv0676c
Position (kb) 774
775
776 Strain fitness (log2 ratio) -2
-1
0
1 at 774.490 kb on - strand, within Rv0674 at 775.492 kb on + strand, within Rv0675 at 775.748 kb on - strand at 775.933 kb on - strand, within Rv0676c at 776.160 kb on + strand, within Rv0676c at 776.160 kb on + strand, within Rv0676c at 776.160 kb on + strand, within Rv0676c at 776.160 kb on + strand, within Rv0676c at 776.160 kb on + strand, within Rv0676c at 776.161 kb on - strand, within Rv0676c at 776.161 kb on - strand, within Rv0676c at 776.161 kb on - strand, within Rv0676c at 776.211 kb on + strand, within Rv0676c at 776.212 kb on - strand, within Rv0676c at 776.412 kb on + strand, within Rv0676c at 776.412 kb on + strand, within Rv0676c at 776.412 kb on + strand, within Rv0676c at 776.413 kb on - strand, within Rv0676c at 776.413 kb on - strand, within Rv0676c at 776.413 kb on - strand, within Rv0676c
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 774,490 - Rv0674 0.59 +0.1 775,492 + Rv0675 0.90 -1.6 775,748 - -0.4 775,933 - Rv0676c 0.12 -2.4 776,160 + Rv0676c 0.20 -0.9 776,160 + Rv0676c 0.20 -1.1 776,160 + Rv0676c 0.20 -0.5 776,160 + Rv0676c 0.20 -0.9 776,160 + Rv0676c 0.20 -1.0 776,161 - Rv0676c 0.20 -0.7 776,161 - Rv0676c 0.20 -1.1 776,161 - Rv0676c 0.20 -1.0 776,211 + Rv0676c 0.22 -0.8 776,212 - Rv0676c 0.22 -0.7 776,412 + Rv0676c 0.29 -0.2 776,412 + Rv0676c 0.29 -0.4 776,412 + Rv0676c 0.29 -0.3 776,413 - Rv0676c 0.29 -1.2 776,413 - Rv0676c 0.29 -0.6 776,413 - Rv0676c 0.29 -1.3
Or see this region's nucleotide sequence