Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3256c

Experiment: L-Aspartic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRv3255c and Rv3256c are separated by 7 nucleotidesRv3256c and Rv3257c overlap by 4 nucleotides Rv3255c: Rv3255c - Probable mannose-6-phosphate isomerase ManA (phosphomannose isomerase) (phosphomannoisomerase) (PMI) (phosphohexoisomerase) (phosphohexomutase), at 3,635,041 to 3,636,267 Rv3255c Rv3256c: Rv3256c - Conserved protein, at 3,636,275 to 3,637,315 Rv3256c Rv3257c: Rv3257c - Probable phosphomannomutase PmmA (PMM) (phosphomannose mutase), at 3,637,312 to 3,638,709 Rv3257c Position (kb) 3636 3637 3638Strain fitness (log2 ratio) -1 0 1at 3636.826 kb on - strand, within Rv3256cat 3637.083 kb on - strand, within Rv3256c

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
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3,636,826 - Rv3256c 0.53 -1.2
3,637,083 - Rv3256c 0.78 -0.5

Or see this region's nucleotide sequence