Experiment: L-Asparagine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv3624c and Rv3625c overlap by 4 nucleotides Rv3625c and Rv3626c overlap by 22 nucleotides Rv3626c and Rv3627c overlap by 4 nucleotides
Rv3624c: Rv3624c - Hypoxanthine-guanine phosphoribosyltransferase Hpt (HGPRT) (HGPRTase) (hypoxanthine phosphoribosyltransferase) (imp pyrophosphorylase) (imp diphosphorylase) (transphosphoribosyltransferase) (guanine phosphoribosyltransferase), at 4,063,254 to 4,063,904
Rv3624c
Rv3625c: Rv3625c - Possible cell cycle protein MesJ, at 4,063,901 to 4,064,872
Rv3625c
Rv3626c: Rv3626c - Conserved hypothetical protein, at 4,064,851 to 4,065,903
Rv3626c
Rv3627c: Rv3627c - Conserved protein, at 4,065,900 to 4,067,285
Rv3627c
Position (kb) 4064
4065
4066 Strain fitness (log2 ratio) -1
0
1 at 4065.185 kb on - strand, within Rv3626c at 4065.193 kb on - strand, within Rv3626c at 4065.366 kb on - strand, within Rv3626c at 4065.489 kb on - strand, within Rv3626c at 4065.534 kb on - strand, within Rv3626c at 4065.534 kb on - strand, within Rv3626c at 4065.534 kb on - strand, within Rv3626c
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (C) remove 4,065,185 - Rv3626c 0.32 +0.4 4,065,193 - Rv3626c 0.32 +0.1 4,065,366 - Rv3626c 0.49 +0.1 4,065,489 - Rv3626c 0.61 -0.4 4,065,534 - Rv3626c 0.65 -0.1 4,065,534 - Rv3626c 0.65 +0.2 4,065,534 - Rv3626c 0.65 +0.6
Or see this region's nucleotide sequence