Experiment: Lactate-Sulfite (30-20 mM) minimal (MoLS3)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2723 and DVU2724 overlap by 4 nucleotides DVU2724 and DVU2725 overlap by 62 nucleotides DVU2725 and DVU2727 are separated by 171 nucleotides DVU2727 and DVU2728 are separated by 9 nucleotides
DVU2723: DVU2723 - tail protein, putative (TIGR), at 2,827,365 to 2,828,489
DVU2723
DVU2724: DVU2724 - phage baseplate assembly protein V, putative (TIGR), at 2,828,486 to 2,829,112
DVU2724
DVU2725: DVU2725 - membrane protein, putative (TIGR), at 2,829,051 to 2,829,401
DVU2725
DVU2727: DVU2727 - conserved hypothetical protein (TIGR), at 2,829,573 to 2,829,929
DVU2727
DVU2728: DVU2728 - tail protein, putative (TIGR), at 2,829,939 to 2,831,000
DVU2728
Position (kb)
2828
2829
2830 Strain fitness (log2 ratio)
-1
0
1 at 2827.525 kb on + strand, within DVU2723 at 2827.529 kb on - strand, within DVU2723 at 2827.588 kb on + strand, within DVU2723 at 2827.617 kb on - strand, within DVU2723 at 2827.669 kb on - strand, within DVU2723 at 2827.669 kb on - strand, within DVU2723 at 2827.689 kb on + strand, within DVU2723 at 2827.707 kb on - strand, within DVU2723 at 2827.730 kb on + strand, within DVU2723 at 2827.848 kb on - strand, within DVU2723 at 2827.924 kb on - strand, within DVU2723 at 2827.942 kb on + strand, within DVU2723 at 2828.043 kb on + strand, within DVU2723 at 2828.077 kb on - strand, within DVU2723 at 2828.079 kb on - strand, within DVU2723 at 2828.107 kb on - strand, within DVU2723 at 2828.130 kb on + strand, within DVU2723 at 2828.217 kb on - strand, within DVU2723 at 2828.258 kb on + strand, within DVU2723 at 2828.310 kb on - strand, within DVU2723 at 2828.388 kb on - strand at 2828.392 kb on + strand at 2828.415 kb on - strand at 2828.416 kb on + strand at 2828.628 kb on + strand, within DVU2724 at 2828.628 kb on + strand, within DVU2724 at 2828.647 kb on + strand, within DVU2724 at 2828.658 kb on + strand, within DVU2724 at 2828.666 kb on - strand, within DVU2724 at 2828.683 kb on + strand, within DVU2724 at 2828.691 kb on - strand, within DVU2724 at 2828.729 kb on - strand, within DVU2724 at 2828.814 kb on + strand, within DVU2724 at 2828.920 kb on + strand, within DVU2724 at 2829.128 kb on + strand, within DVU2725 at 2829.596 kb on - strand at 2829.641 kb on - strand, within DVU2727 at 2829.670 kb on - strand, within DVU2727 at 2829.730 kb on + strand, within DVU2727 at 2829.774 kb on + strand, within DVU2727 at 2829.782 kb on - strand, within DVU2727 at 2829.907 kb on - strand at 2829.907 kb on - strand at 2829.907 kb on - strand at 2829.909 kb on + strand at 2829.917 kb on - strand at 2829.932 kb on - strand at 2829.932 kb on - strand at 2829.959 kb on - strand at 2829.993 kb on + strand at 2830.023 kb on + strand at 2830.031 kb on + strand at 2830.080 kb on - strand, within DVU2728 at 2830.091 kb on - strand, within DVU2728 at 2830.102 kb on - strand, within DVU2728 at 2830.102 kb on - strand, within DVU2728
Per-strain Table
Position Strand Gene LocusTag Fraction Lactate-Sulfite (30-20 mM) minimal (MoLS3) remove 2,827,525 + DVU2723 0.14 +0.0 2,827,529 - DVU2723 0.15 -0.1 2,827,588 + DVU2723 0.20 +1.5 2,827,617 - DVU2723 0.22 -0.1 2,827,669 - DVU2723 0.27 -0.3 2,827,669 - DVU2723 0.27 +0.2 2,827,689 + DVU2723 0.29 +0.2 2,827,707 - DVU2723 0.30 +0.0 2,827,730 + DVU2723 0.32 +0.8 2,827,848 - DVU2723 0.43 -0.4 2,827,924 - DVU2723 0.50 -0.0 2,827,942 + DVU2723 0.51 +1.5 2,828,043 + DVU2723 0.60 -0.7 2,828,077 - DVU2723 0.63 +0.1 2,828,079 - DVU2723 0.63 -0.4 2,828,107 - DVU2723 0.66 +0.1 2,828,130 + DVU2723 0.68 +0.1 2,828,217 - DVU2723 0.76 -0.5 2,828,258 + DVU2723 0.79 -0.3 2,828,310 - DVU2723 0.84 -1.0 2,828,388 - +0.6 2,828,392 + -0.5 2,828,415 - -1.6 2,828,416 + -0.0 2,828,628 + DVU2724 0.23 -0.8 2,828,628 + DVU2724 0.23 -1.6 2,828,647 + DVU2724 0.26 -0.3 2,828,658 + DVU2724 0.27 -1.3 2,828,666 - DVU2724 0.29 -1.3 2,828,683 + DVU2724 0.31 +0.0 2,828,691 - DVU2724 0.33 -0.6 2,828,729 - DVU2724 0.39 -0.5 2,828,814 + DVU2724 0.52 -0.8 2,828,920 + DVU2724 0.69 -0.4 2,829,128 + DVU2725 0.22 +0.7 2,829,596 - +1.4 2,829,641 - DVU2727 0.19 -0.0 2,829,670 - DVU2727 0.27 +0.7 2,829,730 + DVU2727 0.44 -0.6 2,829,774 + DVU2727 0.56 -0.1 2,829,782 - DVU2727 0.59 -0.6 2,829,907 - +0.2 2,829,907 - -0.1 2,829,907 - -0.1 2,829,909 + -0.1 2,829,917 - +1.2 2,829,932 - -0.3 2,829,932 - -0.4 2,829,959 - +0.3 2,829,993 + -0.2 2,830,023 + -0.6 2,830,031 + -0.5 2,830,080 - DVU2728 0.13 -0.5 2,830,091 - DVU2728 0.14 +0.5 2,830,102 - DVU2728 0.15 -0.3 2,830,102 - DVU2728 0.15 -1.1
Or see this region's nucleotide sequence