Experiment: MoLS4 with L-Methionine & L-Threonine (10/10 mM) as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1156 and DVU1157 overlap by 4 nucleotides DVU1157 and DVU1158 are separated by 255 nucleotides DVU1158 and DVU1159 are separated by 182 nucleotides
DVU1156: DVU1156 - sigma-54 dependent transcriptional regulator, putative/response regulator (TIGR), at 1,247,371 to 1,248,810
DVU1156
DVU1157: DVU1157 - sensory box histidine kinase (TIGR), at 1,248,807 to 1,252,064
DVU1157
DVU1158: DVU1158 - hypothetical protein (TIGR), at 1,252,320 to 1,252,634
DVU1158
DVU1159: DVU1159 - hypothetical protein (TIGR), at 1,252,817 to 1,252,963
DVU1159
Position (kb)
1248
1249
1250
1251
1252
1253 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1247.863 kb on + strand, within DVU1156 at 1247.893 kb on - strand, within DVU1156 at 1247.900 kb on - strand, within DVU1156 at 1248.014 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.125 kb on + strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.133 kb on - strand, within DVU1156 at 1248.251 kb on + strand, within DVU1156 at 1248.276 kb on - strand, within DVU1156 at 1248.442 kb on + strand, within DVU1156 at 1248.488 kb on + strand, within DVU1156 at 1248.501 kb on - strand, within DVU1156 at 1248.503 kb on - strand, within DVU1156 at 1248.600 kb on + strand, within DVU1156 at 1248.608 kb on - strand, within DVU1156 at 1248.608 kb on - strand, within DVU1156 at 1248.806 kb on - strand at 1248.982 kb on + strand at 1249.275 kb on - strand, within DVU1157 at 1249.277 kb on + strand, within DVU1157 at 1249.310 kb on + strand, within DVU1157 at 1249.474 kb on - strand, within DVU1157 at 1249.611 kb on + strand, within DVU1157 at 1249.789 kb on + strand, within DVU1157 at 1249.791 kb on + strand, within DVU1157 at 1249.891 kb on + strand, within DVU1157 at 1249.912 kb on + strand, within DVU1157 at 1249.920 kb on + strand, within DVU1157 at 1249.928 kb on - strand, within DVU1157 at 1250.029 kb on - strand, within DVU1157 at 1250.095 kb on + strand, within DVU1157 at 1250.280 kb on + strand, within DVU1157 at 1250.413 kb on + strand, within DVU1157 at 1250.464 kb on + strand, within DVU1157 at 1250.530 kb on - strand, within DVU1157 at 1250.530 kb on - strand, within DVU1157 at 1250.557 kb on - strand, within DVU1157 at 1250.576 kb on + strand, within DVU1157 at 1250.593 kb on + strand, within DVU1157 at 1250.601 kb on - strand, within DVU1157 at 1250.601 kb on - strand, within DVU1157 at 1250.620 kb on + strand, within DVU1157 at 1250.626 kb on - strand, within DVU1157 at 1250.632 kb on + strand, within DVU1157 at 1250.673 kb on + strand, within DVU1157 at 1250.749 kb on + strand, within DVU1157 at 1250.755 kb on + strand, within DVU1157 at 1250.763 kb on - strand, within DVU1157 at 1250.795 kb on + strand, within DVU1157 at 1250.831 kb on + strand, within DVU1157 at 1250.973 kb on - strand, within DVU1157 at 1251.030 kb on - strand, within DVU1157 at 1251.207 kb on + strand, within DVU1157 at 1251.233 kb on - strand, within DVU1157 at 1251.285 kb on - strand, within DVU1157 at 1251.324 kb on - strand, within DVU1157 at 1251.365 kb on + strand, within DVU1157 at 1251.385 kb on + strand, within DVU1157 at 1251.408 kb on + strand, within DVU1157 at 1251.466 kb on + strand, within DVU1157 at 1251.484 kb on - strand, within DVU1157 at 1251.484 kb on - strand, within DVU1157 at 1251.508 kb on + strand, within DVU1157 at 1251.528 kb on + strand, within DVU1157 at 1251.534 kb on + strand, within DVU1157 at 1251.598 kb on - strand, within DVU1157 at 1251.662 kb on - strand, within DVU1157 at 1251.671 kb on - strand, within DVU1157 at 1251.672 kb on - strand, within DVU1157 at 1251.768 kb on - strand at 1251.812 kb on + strand at 1251.847 kb on + strand at 1251.885 kb on + strand at 1251.912 kb on - strand at 1251.974 kb on - strand at 1252.056 kb on + strand at 1252.074 kb on - strand at 1252.124 kb on + strand at 1252.176 kb on + strand at 1252.230 kb on - strand at 1252.254 kb on - strand at 1252.483 kb on - strand, within DVU1158 at 1252.553 kb on + strand, within DVU1158 at 1252.632 kb on - strand at 1252.757 kb on + strand at 1252.774 kb on - strand at 1252.830 kb on + strand at 1252.870 kb on - strand, within DVU1159 at 1253.002 kb on + strand at 1253.045 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Methionine & L-Threonine (10/10 mM) as nutrient remove 1,247,863 + DVU1156 0.34 -0.2 1,247,893 - DVU1156 0.36 +0.1 1,247,900 - DVU1156 0.37 -0.0 1,248,014 + DVU1156 0.45 +1.7 1,248,125 + DVU1156 0.52 -0.8 1,248,125 + DVU1156 0.52 +0.0 1,248,125 + DVU1156 0.52 -1.2 1,248,125 + DVU1156 0.52 -0.1 1,248,125 + DVU1156 0.52 -0.4 1,248,125 + DVU1156 0.52 -0.5 1,248,133 - DVU1156 0.53 -0.1 1,248,133 - DVU1156 0.53 +0.2 1,248,133 - DVU1156 0.53 +0.2 1,248,133 - DVU1156 0.53 -0.0 1,248,133 - DVU1156 0.53 -0.8 1,248,133 - DVU1156 0.53 -0.1 1,248,251 + DVU1156 0.61 -0.5 1,248,276 - DVU1156 0.63 -1.3 1,248,442 + DVU1156 0.74 +0.6 1,248,488 + DVU1156 0.78 -1.6 1,248,501 - DVU1156 0.78 -0.5 1,248,503 - DVU1156 0.79 -0.4 1,248,600 + DVU1156 0.85 +0.1 1,248,608 - DVU1156 0.86 -1.5 1,248,608 - DVU1156 0.86 -0.1 1,248,806 - +0.1 1,248,982 + +0.3 1,249,275 - DVU1157 0.14 -0.8 1,249,277 + DVU1157 0.14 +0.2 1,249,310 + DVU1157 0.15 -1.3 1,249,474 - DVU1157 0.20 -0.5 1,249,611 + DVU1157 0.25 +0.3 1,249,789 + DVU1157 0.30 -0.1 1,249,791 + DVU1157 0.30 +0.1 1,249,891 + DVU1157 0.33 -0.1 1,249,912 + DVU1157 0.34 +2.2 1,249,920 + DVU1157 0.34 -0.7 1,249,928 - DVU1157 0.34 +0.0 1,250,029 - DVU1157 0.38 +0.3 1,250,095 + DVU1157 0.40 -0.4 1,250,280 + DVU1157 0.45 -0.0 1,250,413 + DVU1157 0.49 -0.9 1,250,464 + DVU1157 0.51 -0.1 1,250,530 - DVU1157 0.53 +0.0 1,250,530 - DVU1157 0.53 -1.5 1,250,557 - DVU1157 0.54 -0.2 1,250,576 + DVU1157 0.54 -0.6 1,250,593 + DVU1157 0.55 -0.4 1,250,601 - DVU1157 0.55 +1.4 1,250,601 - DVU1157 0.55 +0.3 1,250,620 + DVU1157 0.56 -0.6 1,250,626 - DVU1157 0.56 -1.5 1,250,632 + DVU1157 0.56 -1.1 1,250,673 + DVU1157 0.57 +0.4 1,250,749 + DVU1157 0.60 +0.0 1,250,755 + DVU1157 0.60 -0.1 1,250,763 - DVU1157 0.60 +0.1 1,250,795 + DVU1157 0.61 -1.1 1,250,831 + DVU1157 0.62 -0.4 1,250,973 - DVU1157 0.66 -0.9 1,251,030 - DVU1157 0.68 -0.4 1,251,207 + DVU1157 0.74 -1.8 1,251,233 - DVU1157 0.74 -0.7 1,251,285 - DVU1157 0.76 +0.1 1,251,324 - DVU1157 0.77 -1.0 1,251,365 + DVU1157 0.79 -1.3 1,251,385 + DVU1157 0.79 -0.3 1,251,408 + DVU1157 0.80 -1.2 1,251,466 + DVU1157 0.82 -1.1 1,251,484 - DVU1157 0.82 -2.5 1,251,484 - DVU1157 0.82 +0.9 1,251,508 + DVU1157 0.83 +0.1 1,251,528 + DVU1157 0.84 -0.5 1,251,534 + DVU1157 0.84 -0.2 1,251,598 - DVU1157 0.86 +0.1 1,251,662 - DVU1157 0.88 -0.6 1,251,671 - DVU1157 0.88 -0.9 1,251,672 - DVU1157 0.88 +0.2 1,251,768 - +0.0 1,251,812 + -0.5 1,251,847 + -0.2 1,251,885 + -0.9 1,251,912 - -1.1 1,251,974 - -0.7 1,252,056 + -0.9 1,252,074 - +0.5 1,252,124 + +0.4 1,252,176 + -0.9 1,252,230 - +0.7 1,252,254 - -0.1 1,252,483 - DVU1158 0.52 -1.3 1,252,553 + DVU1158 0.74 -0.1 1,252,632 - +0.1 1,252,757 + -0.2 1,252,774 - -0.3 1,252,830 + +0.3 1,252,870 - DVU1159 0.36 -1.3 1,253,002 + -0.6 1,253,045 + -0.7
Or see this region's nucleotide sequence