Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0791c and Rv0792c overlap by 4 nucleotides Rv0792c and Rv0793 are separated by 72 nucleotides Rv0793 and Rv0794c are separated by 112 nucleotides
Rv0791c: Rv0791c - Conserved protein, at 884,797 to 885,840
Rv0791c
Rv0792c: Rv0792c - Probable transcriptional regulatory protein (probably GntR-family), at 885,837 to 886,646
Rv0792c
Rv0793: Rv0793 - Possible monooxygenase, at 886,719 to 887,024
Rv0793
Rv0794c: Rv0794c - Probable oxidoreductase, at 887,137 to 888,636
Rv0794c
Position (kb) 886
887
888 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 885.970 kb on + strand, within Rv0792c at 886.030 kb on - strand, within Rv0792c at 886.030 kb on - strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.083 kb on + strand, within Rv0792c at 886.084 kb on - strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.111 kb on + strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.112 kb on - strand, within Rv0792c at 886.232 kb on + strand, within Rv0792c at 886.320 kb on - strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.400 kb on + strand, within Rv0792c at 886.423 kb on - strand, within Rv0792c at 886.835 kb on + strand, within Rv0793 at 886.836 kb on - strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.839 kb on + strand, within Rv0793 at 886.840 kb on - strand, within Rv0793 at 886.935 kb on + strand, within Rv0793 at 886.936 kb on - strand, within Rv0793 at 886.944 kb on + strand, within Rv0793 at 886.944 kb on + strand, within Rv0793 at 886.944 kb on + strand, within Rv0793 at 887.138 kb on + strand at 887.613 kb on - strand, within Rv0794c at 887.738 kb on - strand, within Rv0794c at 887.791 kb on + strand, within Rv0794c at 887.791 kb on + strand, within Rv0794c
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 885,970 + Rv0792c 0.16 +0.1 886,030 - Rv0792c 0.24 -0.3 886,030 - Rv0792c 0.24 +0.5 886,083 + Rv0792c 0.30 +0.0 886,083 + Rv0792c 0.30 +0.2 886,083 + Rv0792c 0.30 -0.7 886,084 - Rv0792c 0.30 -0.3 886,111 + Rv0792c 0.34 +0.8 886,111 + Rv0792c 0.34 -0.7 886,111 + Rv0792c 0.34 +0.6 886,111 + Rv0792c 0.34 -1.0 886,112 - Rv0792c 0.34 -0.2 886,112 - Rv0792c 0.34 +0.0 886,112 - Rv0792c 0.34 +0.2 886,112 - Rv0792c 0.34 -0.2 886,232 + Rv0792c 0.49 -0.8 886,320 - Rv0792c 0.60 +1.8 886,400 + Rv0792c 0.70 +0.4 886,400 + Rv0792c 0.70 +3.4 886,400 + Rv0792c 0.70 +0.0 886,423 - Rv0792c 0.72 -0.4 886,835 + Rv0793 0.38 -0.4 886,836 - Rv0793 0.38 -0.1 886,839 + Rv0793 0.39 -0.4 886,839 + Rv0793 0.39 -2.3 886,839 + Rv0793 0.39 +0.5 886,839 + Rv0793 0.39 -3.7 886,840 - Rv0793 0.40 -0.3 886,935 + Rv0793 0.71 +0.3 886,936 - Rv0793 0.71 -1.2 886,944 + Rv0793 0.74 -0.4 886,944 + Rv0793 0.74 +0.4 886,944 + Rv0793 0.74 +0.3 887,138 + -0.2 887,613 - Rv0794c 0.32 -0.1 887,738 - Rv0794c 0.40 -0.4 887,791 + Rv0794c 0.44 -0.7 887,791 + Rv0794c 0.44 -0.0
Or see this region's nucleotide sequence