Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0766c and Rv0767c overlap by 4 nucleotides Rv0767c and Rv0768 are separated by 201 nucleotides Rv0768 and Rv0769 are separated by 30 nucleotides Rv0769 and Rv0770 are separated by 97 nucleotides
Rv0766c: Rv0766c - Probable cytochrome P450 123 Cyp123, at 858,864 to 860,072
Rv0766c
Rv0767c: Rv0767c - Conserved hypothetical protein, at 860,069 to 860,710
Rv0767c
Rv0768: Rv0768 - Probable aldehyde dehydrogenase NAD dependent AldA (aldehyde dehydrogenase [NAD+]), at 860,912 to 862,381
Rv0768
Rv0769: Rv0769 - Probable dehydrogenase/reductase, at 862,412 to 863,158
Rv0769
Rv0770: Rv0770 - Probable dehydrogenase/reductase, at 863,256 to 864,143
Rv0770
Position (kb) 860
861
862
863 Strain fitness (log2 ratio) -2
-1
0
1
2 at 860.030 kb on - strand at 860.099 kb on - strand at 860.127 kb on + strand at 860.154 kb on + strand, within Rv0767c at 860.180 kb on + strand, within Rv0767c at 860.466 kb on + strand, within Rv0767c at 860.502 kb on + strand, within Rv0767c at 860.502 kb on + strand, within Rv0767c at 860.502 kb on + strand, within Rv0767c at 860.503 kb on - strand, within Rv0767c at 860.508 kb on + strand, within Rv0767c at 860.508 kb on + strand, within Rv0767c at 860.508 kb on + strand, within Rv0767c at 860.603 kb on + strand, within Rv0767c at 860.604 kb on - strand, within Rv0767c at 860.909 kb on + strand at 861.174 kb on + strand, within Rv0768 at 861.255 kb on + strand, within Rv0768 at 861.255 kb on + strand, within Rv0768 at 861.256 kb on - strand, within Rv0768 at 861.951 kb on - strand, within Rv0768 at 861.951 kb on - strand, within Rv0768 at 862.661 kb on + strand, within Rv0769 at 862.662 kb on - strand, within Rv0769 at 862.777 kb on + strand, within Rv0769 at 862.791 kb on - strand, within Rv0769 at 862.938 kb on + strand, within Rv0769 at 862.938 kb on + strand, within Rv0769 at 863.289 kb on + strand at 863.291 kb on + strand at 863.291 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 860,030 - +0.3 860,099 - -0.5 860,127 + +0.8 860,154 + Rv0767c 0.13 -0.5 860,180 + Rv0767c 0.17 +0.1 860,466 + Rv0767c 0.62 +1.8 860,502 + Rv0767c 0.67 +0.1 860,502 + Rv0767c 0.67 +0.2 860,502 + Rv0767c 0.67 -0.2 860,503 - Rv0767c 0.68 +0.6 860,508 + Rv0767c 0.68 +0.0 860,508 + Rv0767c 0.68 +0.2 860,508 + Rv0767c 0.68 +0.0 860,603 + Rv0767c 0.83 +0.1 860,604 - Rv0767c 0.83 -0.2 860,909 + +0.1 861,174 + Rv0768 0.18 +0.2 861,255 + Rv0768 0.23 -0.9 861,255 + Rv0768 0.23 -1.0 861,256 - Rv0768 0.23 -0.1 861,951 - Rv0768 0.71 +1.5 861,951 - Rv0768 0.71 -0.4 862,661 + Rv0769 0.33 -2.3 862,662 - Rv0769 0.33 +0.0 862,777 + Rv0769 0.49 +0.6 862,791 - Rv0769 0.51 +0.2 862,938 + Rv0769 0.70 +0.2 862,938 + Rv0769 0.70 -0.3 863,289 + -0.1 863,291 + -0.1 863,291 + -0.5
Or see this region's nucleotide sequence