Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0758 and Rv0759c overlap by 29 nucleotides Rv0759c and Rv0760c are separated by 109 nucleotides Rv0760c and Rv0761c are separated by 12 nucleotides Rv0761c and Rv0762c are separated by 98 nucleotides Rv0762c and Rv0763c are separated by 2 nucleotides Rv0763c and Rv0764c are separated by 2 nucleotides
Rv0758: Rv0758 - Possible two component system response sensor kinase membrane associated PhoR, at 852,396 to 853,853
Rv0758
Rv0759c: Rv0759c - Conserved hypothetical protein, at 853,825 to 854,157
Rv0759c
Rv0760c: Rv0760c - Conserved protein, at 854,267 to 854,686
Rv0760c
Rv0761c: Rv0761c - Possible zinc-containing alcohol dehydrogenase NAD dependent AdhB, at 854,699 to 855,826
Rv0761c
Rv0762c: Rv0762c - Conserved hypothetical protein, at 855,925 to 856,470
Rv0762c
Rv0763c: Rv0763c - Possible ferredoxin, at 856,473 to 856,679
Rv0763c
Rv0764c: Rv0764c - Cytochrome P450 51 Cyp51 (CYPL1) (P450-L1A1) (sterol 14-alpha demethylase) (lanosterol 14-alpha demethylase) (P450-14DM), at 856,682 to 858,037
Rv0764c
Position (kb) 854
855
856 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 854.237 kb on + strand at 854.237 kb on + strand at 854.238 kb on - strand at 854.238 kb on - strand at 854.238 kb on - strand at 854.238 kb on - strand at 854.518 kb on + strand, within Rv0760c at 854.518 kb on + strand, within Rv0760c at 854.519 kb on - strand, within Rv0760c at 854.790 kb on + strand at 854.791 kb on - strand at 854.835 kb on + strand, within Rv0761c at 854.835 kb on + strand, within Rv0761c at 854.836 kb on - strand, within Rv0761c at 854.836 kb on - strand, within Rv0761c at 855.009 kb on + strand, within Rv0761c at 855.009 kb on + strand, within Rv0761c at 855.009 kb on + strand, within Rv0761c at 855.189 kb on + strand, within Rv0761c at 855.396 kb on + strand, within Rv0761c at 855.396 kb on + strand, within Rv0761c at 855.397 kb on - strand, within Rv0761c at 855.917 kb on + strand at 855.959 kb on + strand at 855.960 kb on - strand at 855.963 kb on - strand at 856.021 kb on + strand, within Rv0762c at 856.142 kb on + strand, within Rv0762c at 856.235 kb on + strand, within Rv0762c at 856.347 kb on - strand, within Rv0762c at 856.347 kb on - strand, within Rv0762c at 856.347 kb on - strand, within Rv0762c at 856.762 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 854,237 + -0.6 854,237 + -0.9 854,238 - -0.5 854,238 - -0.8 854,238 - +0.1 854,238 - +0.1 854,518 + Rv0760c 0.60 -0.7 854,518 + Rv0760c 0.60 +0.5 854,519 - Rv0760c 0.60 -1.7 854,790 + -2.8 854,791 - +0.7 854,835 + Rv0761c 0.12 -0.7 854,835 + Rv0761c 0.12 -0.6 854,836 - Rv0761c 0.12 +1.2 854,836 - Rv0761c 0.12 -0.4 855,009 + Rv0761c 0.27 -2.3 855,009 + Rv0761c 0.27 -0.6 855,009 + Rv0761c 0.27 +0.8 855,189 + Rv0761c 0.43 -1.0 855,396 + Rv0761c 0.62 -0.6 855,396 + Rv0761c 0.62 -1.4 855,397 - Rv0761c 0.62 -0.8 855,917 + -0.3 855,959 + -0.3 855,960 - +0.9 855,963 - +0.5 856,021 + Rv0762c 0.18 +0.6 856,142 + Rv0762c 0.40 -0.4 856,235 + Rv0762c 0.57 -0.8 856,347 - Rv0762c 0.77 +0.1 856,347 - Rv0762c 0.77 -0.6 856,347 - Rv0762c 0.77 +0.8 856,762 - +1.8
Or see this region's nucleotide sequence