Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0729 and Rv0730 are separated by 12 nucleotides Rv0730 and Rv0731c are separated by 88 nucleotides Rv0731c and Rv0732 are separated by 160 nucleotides
Rv0729: Rv0729 - Possible D-xylulose kinase XylB (xylulokinase) (xylulose kinase), at 821,507 to 822,853
Rv0729
Rv0730: Rv0730 - GCN5-related N-acetyltransferase, at 822,866 to 823,594
Rv0730
Rv0731c: Rv0731c - Possible S-adenosylmethionine-dependent methyltransferase, at 823,683 to 824,639
Rv0731c
Rv0732: Rv0732 - Probable preprotein translocase SecY, at 824,800 to 826,125
Rv0732
Position (kb)
823
824
825 Strain fitness (log2 ratio)
-1
0
1 at 822.896 kb on + strand at 822.896 kb on + strand at 822.896 kb on + strand at 822.896 kb on + strand at 822.897 kb on - strand at 823.592 kb on + strand at 823.681 kb on - strand at 823.681 kb on - strand at 823.726 kb on + strand at 823.726 kb on + strand at 823.727 kb on - strand at 823.837 kb on + strand, within Rv0731c at 823.838 kb on - strand, within Rv0731c at 823.838 kb on - strand, within Rv0731c at 823.867 kb on + strand, within Rv0731c at 823.868 kb on - strand, within Rv0731c at 823.868 kb on - strand, within Rv0731c at 823.868 kb on - strand, within Rv0731c at 824.005 kb on - strand, within Rv0731c at 824.059 kb on + strand, within Rv0731c at 824.059 kb on + strand, within Rv0731c at 824.060 kb on - strand, within Rv0731c at 824.212 kb on + strand, within Rv0731c at 824.278 kb on + strand, within Rv0731c at 824.279 kb on - strand, within Rv0731c at 824.362 kb on + strand, within Rv0731c at 824.363 kb on - strand, within Rv0731c at 824.425 kb on - strand, within Rv0731c at 824.460 kb on + strand, within Rv0731c at 824.461 kb on - strand, within Rv0731c at 824.461 kb on - strand, within Rv0731c at 824.461 kb on - strand, within Rv0731c at 824.461 kb on - strand, within Rv0731c at 824.643 kb on + strand at 824.643 kb on + strand at 824.643 kb on + strand at 824.692 kb on + strand at 824.692 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 822,896 + -1.5 822,896 + -0.9 822,896 + +0.1 822,896 + -0.1 822,897 - -0.5 823,592 + +0.5 823,681 - -0.3 823,681 - -0.1 823,726 + -0.2 823,726 + -0.2 823,727 - +0.1 823,837 + Rv0731c 0.16 -0.3 823,838 - Rv0731c 0.16 -0.6 823,838 - Rv0731c 0.16 -0.4 823,867 + Rv0731c 0.19 -0.6 823,868 - Rv0731c 0.19 -0.4 823,868 - Rv0731c 0.19 +0.0 823,868 - Rv0731c 0.19 -0.1 824,005 - Rv0731c 0.34 -0.1 824,059 + Rv0731c 0.39 -1.2 824,059 + Rv0731c 0.39 -0.2 824,060 - Rv0731c 0.39 +0.0 824,212 + Rv0731c 0.55 -0.5 824,278 + Rv0731c 0.62 -1.0 824,279 - Rv0731c 0.62 -1.0 824,362 + Rv0731c 0.71 +0.2 824,363 - Rv0731c 0.71 -0.7 824,425 - Rv0731c 0.78 -0.7 824,460 + Rv0731c 0.81 -0.5 824,461 - Rv0731c 0.81 -0.2 824,461 - Rv0731c 0.81 -0.4 824,461 - Rv0731c 0.81 +0.0 824,461 - Rv0731c 0.81 -0.3 824,643 + -0.3 824,643 + -0.1 824,643 + +0.8 824,692 + -0.2 824,692 + +0.2
Or see this region's nucleotide sequence