Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0712 and Rv0713 are separated by 300 nucleotides Rv0713 and Rv0714 are separated by 485 nucleotides Rv0714 and Rv0715 are separated by 0 nucleotides
Rv0712: Rv0712 - Conserved protein, at 808,746 to 809,645
Rv0712
Rv0713: Rv0713 - Probable conserved transmembrane protein, at 809,946 to 810,887
Rv0713
Rv0714: Rv0714 - 50S ribosomal protein L14 RplN, at 811,373 to 811,741
Rv0714
Rv0715: Rv0715 - 50S ribosomal protein L24 RplX, at 811,742 to 812,059
Rv0715
Position (kb) 809
810
811 Strain fitness (log2 ratio) -1
0
1
2 at 809.054 kb on - strand, within Rv0712 at 809.125 kb on + strand, within Rv0712 at 809.154 kb on + strand, within Rv0712 at 809.232 kb on + strand, within Rv0712 at 809.232 kb on + strand, within Rv0712 at 809.233 kb on - strand, within Rv0712 at 809.233 kb on - strand, within Rv0712 at 809.421 kb on + strand, within Rv0712 at 809.421 kb on + strand, within Rv0712 at 809.422 kb on - strand, within Rv0712 at 809.544 kb on + strand, within Rv0712 at 809.716 kb on + strand at 809.717 kb on - strand at 810.284 kb on + strand, within Rv0713 at 810.307 kb on - strand, within Rv0713 at 810.337 kb on - strand, within Rv0713 at 810.413 kb on + strand, within Rv0713 at 810.413 kb on + strand, within Rv0713 at 810.413 kb on + strand, within Rv0713 at 810.413 kb on + strand, within Rv0713 at 810.414 kb on - strand, within Rv0713 at 810.417 kb on + strand, within Rv0713 at 810.417 kb on + strand, within Rv0713 at 810.417 kb on + strand, within Rv0713 at 810.417 kb on + strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.418 kb on - strand, within Rv0713 at 810.474 kb on + strand, within Rv0713 at 810.475 kb on - strand, within Rv0713 at 810.765 kb on - strand, within Rv0713 at 810.855 kb on + strand at 810.855 kb on + strand at 810.886 kb on - strand at 810.886 kb on - strand at 810.973 kb on - strand at 811.071 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 809,054 - Rv0712 0.34 -0.2 809,125 + Rv0712 0.42 -0.1 809,154 + Rv0712 0.45 +0.7 809,232 + Rv0712 0.54 -0.1 809,232 + Rv0712 0.54 -1.5 809,233 - Rv0712 0.54 -0.7 809,233 - Rv0712 0.54 +0.5 809,421 + Rv0712 0.75 -1.6 809,421 + Rv0712 0.75 +0.2 809,422 - Rv0712 0.75 -0.1 809,544 + Rv0712 0.89 -0.2 809,716 + -0.2 809,717 - -0.4 810,284 + Rv0713 0.36 +0.2 810,307 - Rv0713 0.38 +0.0 810,337 - Rv0713 0.42 -0.0 810,413 + Rv0713 0.50 -0.3 810,413 + Rv0713 0.50 -0.1 810,413 + Rv0713 0.50 -0.5 810,413 + Rv0713 0.50 +0.2 810,414 - Rv0713 0.50 +0.7 810,417 + Rv0713 0.50 +1.1 810,417 + Rv0713 0.50 +1.8 810,417 + Rv0713 0.50 -0.5 810,417 + Rv0713 0.50 -0.2 810,418 - Rv0713 0.50 +1.0 810,418 - Rv0713 0.50 +0.0 810,418 - Rv0713 0.50 -0.0 810,418 - Rv0713 0.50 +0.4 810,418 - Rv0713 0.50 -0.2 810,474 + Rv0713 0.56 -0.2 810,475 - Rv0713 0.56 -0.0 810,765 - Rv0713 0.87 +0.2 810,855 + -0.0 810,855 + +0.3 810,886 - -0.8 810,886 - +0.8 810,973 - +0.3 811,071 + -0.3
Or see this region's nucleotide sequence