Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0631c and Rv0632c are separated by 276 nucleotides Rv0632c and Rv0633c are separated by 48 nucleotides
Rv0631c: Rv0631c - Probable exonuclease V (gamma chain) RecC (exodeoxyribonuclease V gamma chain)(exodeoxyribonuclease V polypeptide), at 725,013 to 728,306
Rv0631c
Rv0632c: Rv0632c - Probable enoyl-CoA hydratase EchA3 (enoyl hydrase) (unsaturated acyl-CoA hydratase) (crotonase), at 728,583 to 729,278
Rv0632c
Rv0633c: Rv0633c - Possible exported protein, at 729,327 to 730,166
Rv0633c
Position (kb) 728
729
730 Strain fitness (log2 ratio) -1
0
1 at 727.861 kb on + strand, within Rv0631c at 727.862 kb on - strand, within Rv0631c at 728.360 kb on - strand at 728.360 kb on - strand at 728.360 kb on - strand at 728.540 kb on + strand at 728.585 kb on - strand at 728.908 kb on + strand, within Rv0632c at 728.909 kb on - strand, within Rv0632c at 729.020 kb on - strand, within Rv0632c at 729.257 kb on + strand at 729.260 kb on - strand at 729.260 kb on - strand at 729.328 kb on + strand at 729.508 kb on + strand, within Rv0633c at 729.508 kb on + strand, within Rv0633c at 729.521 kb on + strand, within Rv0633c at 729.522 kb on - strand, within Rv0633c at 729.522 kb on - strand, within Rv0633c at 729.522 kb on - strand, within Rv0633c at 729.525 kb on + strand, within Rv0633c at 729.526 kb on - strand, within Rv0633c at 729.691 kb on + strand, within Rv0633c at 729.692 kb on - strand, within Rv0633c at 729.694 kb on + strand, within Rv0633c at 729.695 kb on - strand, within Rv0633c at 729.838 kb on + strand, within Rv0633c at 729.905 kb on - strand, within Rv0633c at 729.934 kb on - strand, within Rv0633c at 729.989 kb on - strand, within Rv0633c at 729.989 kb on - strand, within Rv0633c at 730.172 kb on + strand at 730.173 kb on - strand at 730.173 kb on - strand at 730.173 kb on - strand at 730.174 kb on + strand at 730.201 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 727,861 + Rv0631c 0.86 +0.1 727,862 - Rv0631c 0.86 -0.6 728,360 - -0.1 728,360 - -0.6 728,360 - -0.1 728,540 + -0.3 728,585 - -0.2 728,908 + Rv0632c 0.47 -0.4 728,909 - Rv0632c 0.47 -0.5 729,020 - Rv0632c 0.63 +0.4 729,257 + -1.1 729,260 - +0.0 729,260 - -0.9 729,328 + -1.1 729,508 + Rv0633c 0.22 +0.0 729,508 + Rv0633c 0.22 -0.5 729,521 + Rv0633c 0.23 +0.1 729,522 - Rv0633c 0.23 -0.2 729,522 - Rv0633c 0.23 +0.2 729,522 - Rv0633c 0.23 +0.1 729,525 + Rv0633c 0.24 -0.6 729,526 - Rv0633c 0.24 -0.0 729,691 + Rv0633c 0.43 -0.6 729,692 - Rv0633c 0.43 +0.1 729,694 + Rv0633c 0.44 +0.0 729,695 - Rv0633c 0.44 -0.3 729,838 + Rv0633c 0.61 -0.1 729,905 - Rv0633c 0.69 -0.2 729,934 - Rv0633c 0.72 +0.1 729,989 - Rv0633c 0.79 -0.5 729,989 - Rv0633c 0.79 +0.3 730,172 + -0.4 730,173 - +0.2 730,173 - -1.4 730,173 - +0.5 730,174 + +0.4 730,201 + +0.2
Or see this region's nucleotide sequence