Experiment: MoLS4 with L-Methionine (10mM) as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2432 and DVU2434 are separated by 338 nucleotides DVU2434 and corA are separated by 366 nucleotides
DVU2432: DVU2432 - sensory box/GGDEF domain/EAL domain protein (TIGR), at 2,533,787 to 2,538,028
DVU2432
DVU2434: DVU2434 - hypothetical protein (TIGR), at 2,538,367 to 2,538,774
DVU2434
DVU2435: corA - transporter, CorA family (TIGR), at 2,539,141 to 2,540,088
corA
Position (kb)
2538
2539 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2537.422 kb on + strand, within DVU2432 at 2537.489 kb on - strand, within DVU2432 at 2537.492 kb on + strand, within DVU2432 at 2537.515 kb on - strand, within DVU2432 at 2537.515 kb on - strand, within DVU2432 at 2537.541 kb on - strand, within DVU2432 at 2537.541 kb on - strand, within DVU2432 at 2537.541 kb on - strand, within DVU2432 at 2537.661 kb on + strand at 2537.736 kb on - strand at 2537.781 kb on - strand at 2537.874 kb on + strand at 2537.874 kb on - strand at 2537.908 kb on - strand at 2537.971 kb on + strand at 2538.001 kb on + strand at 2538.038 kb on + strand at 2538.140 kb on + strand at 2538.209 kb on - strand at 2538.263 kb on - strand at 2538.306 kb on - strand at 2538.317 kb on + strand at 2538.367 kb on - strand at 2538.442 kb on + strand, within DVU2434 at 2538.473 kb on - strand, within DVU2434 at 2538.518 kb on + strand, within DVU2434 at 2538.523 kb on + strand, within DVU2434 at 2538.523 kb on + strand, within DVU2434 at 2538.526 kb on - strand, within DVU2434 at 2538.612 kb on - strand, within DVU2434 at 2538.682 kb on + strand, within DVU2434 at 2538.697 kb on - strand, within DVU2434 at 2538.764 kb on + strand at 2538.787 kb on - strand at 2538.798 kb on - strand at 2538.837 kb on + strand at 2538.845 kb on - strand at 2538.845 kb on - strand at 2538.845 kb on - strand at 2538.850 kb on - strand at 2538.850 kb on - strand at 2538.911 kb on + strand at 2538.937 kb on + strand at 2538.985 kb on + strand at 2539.018 kb on - strand at 2539.267 kb on - strand, within corA at 2539.301 kb on - strand, within corA at 2539.357 kb on - strand, within corA at 2539.362 kb on + strand, within corA at 2539.370 kb on - strand, within corA at 2539.370 kb on - strand, within corA at 2539.416 kb on + strand, within corA at 2539.470 kb on + strand, within corA at 2539.486 kb on + strand, within corA at 2539.494 kb on - strand, within corA at 2539.519 kb on - strand, within corA at 2539.609 kb on - strand, within corA at 2539.611 kb on + strand, within corA at 2539.619 kb on + strand, within corA at 2539.729 kb on + strand, within corA
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Methionine (10mM) as nutrient remove 2,537,422 + DVU2432 0.86 -0.1 2,537,489 - DVU2432 0.87 -0.7 2,537,492 + DVU2432 0.87 -0.8 2,537,515 - DVU2432 0.88 -1.4 2,537,515 - DVU2432 0.88 -0.1 2,537,541 - DVU2432 0.88 -0.1 2,537,541 - DVU2432 0.88 -1.1 2,537,541 - DVU2432 0.88 -1.5 2,537,661 + -0.2 2,537,736 - +0.1 2,537,781 - +1.1 2,537,874 + +0.5 2,537,874 - -0.6 2,537,908 - -0.3 2,537,971 + +0.1 2,538,001 + -0.0 2,538,038 + -0.5 2,538,140 + +0.6 2,538,209 - +0.2 2,538,263 - -0.9 2,538,306 - -0.0 2,538,317 + +0.4 2,538,367 - +0.3 2,538,442 + DVU2434 0.18 +1.5 2,538,473 - DVU2434 0.26 -0.7 2,538,518 + DVU2434 0.37 -1.2 2,538,523 + DVU2434 0.38 -1.0 2,538,523 + DVU2434 0.38 -1.0 2,538,526 - DVU2434 0.39 -0.5 2,538,612 - DVU2434 0.60 -0.9 2,538,682 + DVU2434 0.77 -0.6 2,538,697 - DVU2434 0.81 -1.4 2,538,764 + +0.1 2,538,787 - -0.6 2,538,798 - +0.2 2,538,837 + -0.3 2,538,845 - -1.0 2,538,845 - -0.4 2,538,845 - -1.0 2,538,850 - -0.1 2,538,850 - -0.3 2,538,911 + -1.3 2,538,937 + +0.2 2,538,985 + -2.1 2,539,018 - -1.7 2,539,267 - corA DVU2435 0.13 -0.7 2,539,301 - corA DVU2435 0.17 -1.0 2,539,357 - corA DVU2435 0.23 +0.2 2,539,362 + corA DVU2435 0.23 +1.9 2,539,370 - corA DVU2435 0.24 +0.0 2,539,370 - corA DVU2435 0.24 -0.4 2,539,416 + corA DVU2435 0.29 -0.3 2,539,470 + corA DVU2435 0.35 -0.4 2,539,486 + corA DVU2435 0.36 -0.3 2,539,494 - corA DVU2435 0.37 -0.5 2,539,519 - corA DVU2435 0.40 -0.3 2,539,609 - corA DVU2435 0.49 -0.5 2,539,611 + corA DVU2435 0.50 +0.3 2,539,619 + corA DVU2435 0.50 -0.5 2,539,729 + corA DVU2435 0.62 -0.0
Or see this region's nucleotide sequence