Experiment: MoLS4 with L-Methionine (10mM) as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0077 and DVU0078 are separated by 46 nucleotides DVU0078 and gufA are separated by 372 nucleotides
DVU0077: DVU0077 - conserved hypothetical protein (TIGR), at 94,316 to 95,398
DVU0077
DVU0078: DVU0078 - conserved hypothetical protein (TIGR), at 95,445 to 95,786
DVU0078
DVU0079: gufA - ZIP zinc transporter family protein (TIGR), at 96,159 to 96,962
gufA
Position (kb) 95
96 Strain fitness (log2 ratio) -2
-1
0
1 at 94.498 kb on - strand, within DVU0077 at 94.523 kb on + strand, within DVU0077 at 94.523 kb on + strand, within DVU0077 at 94.531 kb on - strand, within DVU0077 at 94.536 kb on - strand, within DVU0077 at 94.542 kb on + strand, within DVU0077 at 94.621 kb on + strand, within DVU0077 at 94.747 kb on + strand, within DVU0077 at 94.747 kb on + strand, within DVU0077 at 94.772 kb on + strand, within DVU0077 at 94.772 kb on + strand, within DVU0077 at 94.777 kb on + strand, within DVU0077 at 94.782 kb on + strand, within DVU0077 at 94.785 kb on - strand, within DVU0077 at 94.785 kb on - strand, within DVU0077 at 94.792 kb on + strand, within DVU0077 at 94.813 kb on - strand, within DVU0077 at 94.836 kb on + strand, within DVU0077 at 94.910 kb on + strand, within DVU0077 at 94.962 kb on - strand, within DVU0077 at 94.972 kb on - strand, within DVU0077 at 95.054 kb on - strand, within DVU0077 at 95.081 kb on + strand, within DVU0077 at 95.081 kb on + strand, within DVU0077 at 95.099 kb on - strand, within DVU0077 at 95.114 kb on + strand, within DVU0077 at 95.116 kb on - strand, within DVU0077 at 95.269 kb on + strand, within DVU0077 at 95.282 kb on - strand, within DVU0077 at 95.309 kb on - strand at 95.311 kb on + strand at 95.311 kb on + strand at 95.318 kb on + strand at 95.319 kb on - strand at 95.319 kb on - strand at 95.319 kb on - strand at 95.319 kb on - strand at 95.361 kb on - strand at 95.388 kb on - strand at 95.417 kb on - strand at 95.441 kb on - strand at 95.449 kb on - strand at 95.481 kb on + strand, within DVU0078 at 95.549 kb on - strand, within DVU0078 at 95.563 kb on + strand, within DVU0078 at 95.571 kb on - strand, within DVU0078 at 95.571 kb on - strand, within DVU0078 at 95.590 kb on + strand, within DVU0078 at 95.666 kb on - strand, within DVU0078 at 95.695 kb on - strand, within DVU0078 at 95.727 kb on + strand, within DVU0078 at 95.729 kb on - strand, within DVU0078 at 95.735 kb on - strand, within DVU0078 at 95.750 kb on + strand, within DVU0078 at 95.779 kb on + strand at 95.786 kb on + strand at 95.786 kb on + strand at 95.787 kb on - strand at 95.794 kb on - strand at 95.794 kb on - strand at 95.794 kb on - strand at 95.794 kb on - strand at 95.810 kb on - strand at 95.829 kb on + strand at 95.847 kb on - strand at 95.866 kb on - strand at 95.872 kb on - strand at 95.904 kb on + strand at 95.918 kb on - strand at 95.974 kb on + strand at 95.976 kb on - strand at 96.004 kb on + strand at 96.004 kb on + strand at 96.035 kb on - strand at 96.076 kb on + strand at 96.081 kb on + strand at 96.089 kb on - strand at 96.092 kb on + strand at 96.092 kb on + strand at 96.100 kb on - strand at 96.102 kb on + strand at 96.102 kb on + strand at 96.102 kb on + strand at 96.102 kb on + strand at 96.102 kb on + strand at 96.102 kb on + strand at 96.102 kb on + strand at 96.102 kb on + strand at 96.102 kb on + strand at 96.110 kb on - strand at 96.110 kb on - strand at 96.110 kb on - strand at 96.110 kb on - strand at 96.202 kb on + strand at 96.221 kb on + strand at 96.221 kb on + strand at 96.221 kb on + strand at 96.221 kb on + strand at 96.229 kb on - strand at 96.229 kb on - strand at 96.231 kb on + strand at 96.243 kb on + strand, within gufA at 96.251 kb on - strand, within gufA at 96.251 kb on - strand, within gufA at 96.291 kb on + strand, within gufA at 96.354 kb on - strand, within gufA at 96.371 kb on + strand, within gufA at 96.399 kb on - strand, within gufA at 96.464 kb on - strand, within gufA at 96.549 kb on + strand, within gufA at 96.599 kb on + strand, within gufA at 96.611 kb on + strand, within gufA at 96.611 kb on + strand, within gufA at 96.638 kb on + strand, within gufA at 96.638 kb on + strand, within gufA at 96.646 kb on - strand, within gufA at 96.656 kb on - strand, within gufA at 96.679 kb on + strand, within gufA at 96.703 kb on - strand, within gufA at 96.747 kb on + strand, within gufA
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Methionine (10mM) as nutrient remove 94,498 - DVU0077 0.17 +0.2 94,523 + DVU0077 0.19 -0.9 94,523 + DVU0077 0.19 -1.0 94,531 - DVU0077 0.20 -0.3 94,536 - DVU0077 0.20 +0.1 94,542 + DVU0077 0.21 -1.0 94,621 + DVU0077 0.28 +0.2 94,747 + DVU0077 0.40 -1.4 94,747 + DVU0077 0.40 +0.4 94,772 + DVU0077 0.42 -0.0 94,772 + DVU0077 0.42 +0.3 94,777 + DVU0077 0.43 -0.3 94,782 + DVU0077 0.43 +0.6 94,785 - DVU0077 0.43 +0.4 94,785 - DVU0077 0.43 -0.5 94,792 + DVU0077 0.44 +0.2 94,813 - DVU0077 0.46 +0.9 94,836 + DVU0077 0.48 +0.3 94,910 + DVU0077 0.55 +0.4 94,962 - DVU0077 0.60 +0.3 94,972 - DVU0077 0.61 -0.7 95,054 - DVU0077 0.68 +0.1 95,081 + DVU0077 0.71 +1.6 95,081 + DVU0077 0.71 -0.7 95,099 - DVU0077 0.72 +0.5 95,114 + DVU0077 0.74 -0.9 95,116 - DVU0077 0.74 +0.2 95,269 + DVU0077 0.88 -0.5 95,282 - DVU0077 0.89 +0.1 95,309 - -0.4 95,311 + +1.3 95,311 + -0.4 95,318 + +1.0 95,319 - -1.5 95,319 - -0.6 95,319 - -0.2 95,319 - +0.1 95,361 - +0.2 95,388 - +1.0 95,417 - -0.7 95,441 - +0.2 95,449 - +0.2 95,481 + DVU0078 0.11 +0.9 95,549 - DVU0078 0.30 +0.1 95,563 + DVU0078 0.35 -1.0 95,571 - DVU0078 0.37 -1.2 95,571 - DVU0078 0.37 +0.3 95,590 + DVU0078 0.42 -0.3 95,666 - DVU0078 0.65 -0.6 95,695 - DVU0078 0.73 -0.3 95,727 + DVU0078 0.82 -1.3 95,729 - DVU0078 0.83 -1.0 95,735 - DVU0078 0.85 +0.0 95,750 + DVU0078 0.89 -1.3 95,779 + -1.2 95,786 + +0.3 95,786 + -0.2 95,787 - -0.4 95,794 - -0.1 95,794 - +1.4 95,794 - -0.6 95,794 - +0.1 95,810 - -0.7 95,829 + -0.4 95,847 - -1.2 95,866 - -0.2 95,872 - +0.8 95,904 + +0.3 95,918 - -2.2 95,974 + -0.6 95,976 - -0.2 96,004 + +0.6 96,004 + -0.2 96,035 - +0.3 96,076 + -1.4 96,081 + -2.2 96,089 - -2.2 96,092 + -0.1 96,092 + -0.2 96,100 - -0.1 96,102 + -0.4 96,102 + +1.1 96,102 + -1.3 96,102 + +0.2 96,102 + -0.7 96,102 + -0.9 96,102 + +0.2 96,102 + +0.2 96,102 + -1.3 96,110 - -0.4 96,110 - +0.8 96,110 - -0.2 96,110 - +0.1 96,202 + -1.0 96,221 + -0.2 96,221 + -0.7 96,221 + +0.3 96,221 + +0.1 96,229 - -1.3 96,229 - -0.9 96,231 + -1.1 96,243 + gufA DVU0079 0.10 -0.2 96,251 - gufA DVU0079 0.11 -0.2 96,251 - gufA DVU0079 0.11 -0.8 96,291 + gufA DVU0079 0.16 -0.9 96,354 - gufA DVU0079 0.24 +1.4 96,371 + gufA DVU0079 0.26 -0.0 96,399 - gufA DVU0079 0.30 -0.1 96,464 - gufA DVU0079 0.38 +0.7 96,549 + gufA DVU0079 0.49 -1.0 96,599 + gufA DVU0079 0.55 +0.6 96,611 + gufA DVU0079 0.56 -0.5 96,611 + gufA DVU0079 0.56 +0.5 96,638 + gufA DVU0079 0.60 +0.4 96,638 + gufA DVU0079 0.60 +0.2 96,646 - gufA DVU0079 0.61 -1.4 96,656 - gufA DVU0079 0.62 +0.0 96,679 + gufA DVU0079 0.65 -1.1 96,703 - gufA DVU0079 0.68 -0.2 96,747 + gufA DVU0079 0.73 +0.2
Or see this region's nucleotide sequence