Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0536 and Rv0537c are separated by 9 nucleotides Rv0537c and Rv0538 are separated by 308 nucleotides
Rv0536: Rv0536 - Probable UDP-glucose 4-epimerase GalE3 (galactowaldenase) (UDP-galactose 4-epimerase) (uridine diphosphate galactose 4-epimerase) (uridine diphospho-galactose 4-epimerase), at 627,248 to 628,288
Rv0536
Rv0537c: Rv0537c - Probable integral membrane protein, at 628,298 to 629,731
Rv0537c
Rv0538: Rv0538 - Possible conserved membrane protein, at 630,040 to 631,686
Rv0538
Position (kb) 628
629
630 Strain fitness (log2 ratio) -1
0
1 at 627.620 kb on + strand, within Rv0536 at 627.620 kb on + strand, within Rv0536 at 627.621 kb on - strand, within Rv0536 at 627.621 kb on - strand, within Rv0536 at 627.774 kb on - strand, within Rv0536 at 627.866 kb on + strand, within Rv0536 at 627.867 kb on - strand, within Rv0536 at 628.163 kb on + strand, within Rv0536 at 628.299 kb on + strand at 628.299 kb on + strand at 628.323 kb on + strand at 628.323 kb on + strand at 628.620 kb on - strand, within Rv0537c at 628.740 kb on + strand, within Rv0537c at 628.741 kb on - strand, within Rv0537c at 628.944 kb on + strand, within Rv0537c at 629.095 kb on + strand, within Rv0537c at 629.151 kb on + strand, within Rv0537c at 629.151 kb on + strand, within Rv0537c at 629.151 kb on + strand, within Rv0537c at 629.152 kb on - strand, within Rv0537c at 629.152 kb on - strand, within Rv0537c at 629.227 kb on - strand, within Rv0537c at 629.279 kb on - strand, within Rv0537c at 629.342 kb on - strand, within Rv0537c at 629.631 kb on + strand at 629.632 kb on - strand at 629.829 kb on + strand at 629.829 kb on + strand at 629.829 kb on + strand at 629.830 kb on - strand at 629.830 kb on - strand at 629.936 kb on + strand at 629.958 kb on + strand at 629.958 kb on + strand at 629.958 kb on + strand at 629.987 kb on - strand at 629.987 kb on - strand at 630.167 kb on + strand at 630.401 kb on + strand, within Rv0538 at 630.546 kb on + strand, within Rv0538 at 630.546 kb on + strand, within Rv0538 at 630.547 kb on - strand, within Rv0538 at 630.547 kb on - strand, within Rv0538 at 630.672 kb on + strand, within Rv0538
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 627,620 + Rv0536 0.36 +0.8 627,620 + Rv0536 0.36 -0.3 627,621 - Rv0536 0.36 +0.3 627,621 - Rv0536 0.36 +0.1 627,774 - Rv0536 0.51 -0.0 627,866 + Rv0536 0.59 -0.3 627,867 - Rv0536 0.59 -0.1 628,163 + Rv0536 0.88 -0.5 628,299 + +0.1 628,299 + -0.3 628,323 + -1.4 628,323 + -0.3 628,620 - Rv0537c 0.22 -0.0 628,740 + Rv0537c 0.31 +0.6 628,741 - Rv0537c 0.31 -0.2 628,944 + Rv0537c 0.45 -0.1 629,095 + Rv0537c 0.56 -0.3 629,151 + Rv0537c 0.59 +0.5 629,151 + Rv0537c 0.59 -0.5 629,151 + Rv0537c 0.59 +1.2 629,152 - Rv0537c 0.60 +0.3 629,152 - Rv0537c 0.60 +0.5 629,227 - Rv0537c 0.65 +1.0 629,279 - Rv0537c 0.68 -1.5 629,342 - Rv0537c 0.73 +0.2 629,631 + -0.1 629,632 - -0.4 629,829 + -0.4 629,829 + +1.0 629,829 + -0.3 629,830 - +0.4 629,830 - +0.0 629,936 + -0.3 629,958 + -0.2 629,958 + -0.8 629,958 + -0.1 629,987 - -0.7 629,987 - -0.4 630,167 + +0.0 630,401 + Rv0538 0.22 -0.3 630,546 + Rv0538 0.31 +0.6 630,546 + Rv0538 0.31 -0.3 630,547 - Rv0538 0.31 -1.0 630,547 - Rv0538 0.31 -0.3 630,672 + Rv0538 0.38 -0.0
Or see this region's nucleotide sequence