Experiment: MoLS4 with L-Methionine (1mM) as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0457 and DORF5389 are separated by 245 nucleotides DORF5389 and DVU0458 are separated by 378 nucleotides DVU0458 and DVU0459 are separated by 41 nucleotides DVU0459 and DVU0460 are separated by 214 nucleotides
DVU0457: DVU0457 - EAL domain protein (TIGR), at 525,113 to 526,363
DVU0457
DORF5389: DORF5389 - no description, at 526,609 to 526,767
DORF5389
DVU0458: DVU0458 - hypothetical protein (TIGR), at 527,146 to 527,313
DVU0458
DVU0459: DVU0459 - hypothetical protein (TIGR), at 527,355 to 527,456
DVU0459
DVU0460: DVU0460 - predicted phospho-2-dehydro-3-deoxyheptonate aldolase (TIGR), at 527,671 to 528,471
DVU0460
Position (kb) 527
528 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 526.432 kb on - strand at 526.449 kb on + strand at 526.457 kb on - strand at 526.490 kb on - strand at 526.503 kb on + strand at 526.508 kb on + strand at 526.527 kb on + strand at 526.574 kb on - strand at 526.617 kb on - strand at 526.637 kb on + strand, within DORF5389 at 526.637 kb on + strand, within DORF5389 at 526.645 kb on - strand, within DORF5389 at 526.645 kb on - strand, within DORF5389 at 526.659 kb on + strand, within DORF5389 at 526.667 kb on - strand, within DORF5389 at 526.708 kb on - strand, within DORF5389 at 526.748 kb on - strand, within DORF5389 at 526.817 kb on + strand at 526.823 kb on - strand at 526.825 kb on - strand at 526.842 kb on - strand at 526.884 kb on + strand at 527.013 kb on - strand at 527.016 kb on + strand at 527.024 kb on - strand at 527.031 kb on + strand at 527.069 kb on + strand at 527.363 kb on + strand at 527.445 kb on - strand, within DVU0459 at 527.601 kb on - strand at 527.661 kb on + strand at 527.688 kb on + strand at 527.688 kb on + strand at 527.848 kb on + strand, within DVU0460 at 528.006 kb on + strand, within DVU0460 at 528.075 kb on + strand, within DVU0460 at 528.204 kb on + strand, within DVU0460 at 528.396 kb on + strand at 528.396 kb on + strand at 528.404 kb on - strand at 528.404 kb on - strand at 528.421 kb on + strand at 528.425 kb on + strand at 528.426 kb on + strand at 528.439 kb on + strand at 528.444 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Methionine (1mM) as nutrient remove 526,432 - +0.1 526,449 + -0.1 526,457 - -0.3 526,490 - -1.1 526,503 + +0.1 526,508 + -0.6 526,527 + -0.1 526,574 - +0.2 526,617 - -1.2 526,637 + DORF5389 0.18 -0.1 526,637 + DORF5389 0.18 -0.1 526,645 - DORF5389 0.23 -0.6 526,645 - DORF5389 0.23 +0.1 526,659 + DORF5389 0.31 +0.3 526,667 - DORF5389 0.36 -1.1 526,708 - DORF5389 0.62 -1.6 526,748 - DORF5389 0.87 -2.2 526,817 + +0.6 526,823 - +0.5 526,825 - -0.8 526,842 - +0.2 526,884 + -1.7 527,013 - -0.6 527,016 + -0.1 527,024 - +1.0 527,031 + +0.3 527,069 + +0.2 527,363 + -5.0 527,445 - DVU0459 0.88 -2.9 527,601 - -0.6 527,661 + -4.1 527,688 + -2.1 527,688 + -3.2 527,848 + DVU0460 0.22 -1.4 528,006 + DVU0460 0.42 +1.6 528,075 + DVU0460 0.50 -2.3 528,204 + DVU0460 0.67 -2.3 528,396 + -0.0 528,396 + -3.2 528,404 - +0.6 528,404 - -0.9 528,421 + -3.2 528,425 + -2.3 528,426 + -1.4 528,439 + -4.1 528,444 + -5.1
Or see this region's nucleotide sequence