Experiment: MoLS4 with L-Methionine (1mM) as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2683 and DVU2684 are separated by 148 nucleotides DVU2684 and DVU2686 are separated by 567 nucleotides
DVU2683: DVU2683 - L-lactate permease family protein (TIGR), at 2,796,644 to 2,798,194
DVU2683
DVU2684: DVU2684 - hypothetical protein (TIGR), at 2,798,343 to 2,799,023
DVU2684
DVU2686: DVU2686 - peptidase, S24 family (TIGR), at 2,799,591 to 2,800,373
DVU2686
Position (kb)
2798
2799
2800 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2797.442 kb on + strand, within DVU2683 at 2797.714 kb on - strand, within DVU2683 at 2797.719 kb on - strand, within DVU2683 at 2797.836 kb on - strand, within DVU2683 at 2797.910 kb on - strand, within DVU2683 at 2797.960 kb on + strand, within DVU2683 at 2797.972 kb on + strand, within DVU2683 at 2797.979 kb on + strand, within DVU2683 at 2798.101 kb on - strand at 2798.157 kb on - strand at 2798.163 kb on + strand at 2798.257 kb on - strand at 2798.354 kb on - strand at 2798.359 kb on - strand at 2798.677 kb on + strand, within DVU2684 at 2798.688 kb on - strand, within DVU2684 at 2798.820 kb on + strand, within DVU2684 at 2798.850 kb on - strand, within DVU2684 at 2798.868 kb on + strand, within DVU2684 at 2798.868 kb on + strand, within DVU2684 at 2798.944 kb on + strand, within DVU2684 at 2799.015 kb on - strand at 2799.020 kb on - strand at 2799.031 kb on + strand at 2799.039 kb on - strand at 2799.057 kb on - strand at 2799.129 kb on - strand at 2799.155 kb on + strand at 2799.174 kb on + strand at 2799.177 kb on - strand at 2799.182 kb on - strand at 2799.182 kb on - strand at 2799.205 kb on - strand at 2799.453 kb on + strand at 2799.456 kb on - strand at 2799.461 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Methionine (1mM) as nutrient remove 2,797,442 + DVU2683 0.51 -0.5 2,797,714 - DVU2683 0.69 -0.4 2,797,719 - DVU2683 0.69 -1.3 2,797,836 - DVU2683 0.77 -0.3 2,797,910 - DVU2683 0.82 -0.7 2,797,960 + DVU2683 0.85 -2.2 2,797,972 + DVU2683 0.86 +0.0 2,797,979 + DVU2683 0.86 +0.3 2,798,101 - +0.6 2,798,157 - +0.6 2,798,163 + -0.7 2,798,257 - -0.5 2,798,354 - +0.1 2,798,359 - +0.0 2,798,677 + DVU2684 0.49 -1.1 2,798,688 - DVU2684 0.51 -0.1 2,798,820 + DVU2684 0.70 -3.2 2,798,850 - DVU2684 0.74 -0.4 2,798,868 + DVU2684 0.77 -1.8 2,798,868 + DVU2684 0.77 -1.6 2,798,944 + DVU2684 0.88 -0.7 2,799,015 - +0.0 2,799,020 - -0.2 2,799,031 + +0.3 2,799,039 - +0.6 2,799,057 - -1.5 2,799,129 - -0.4 2,799,155 + +0.1 2,799,174 + -2.1 2,799,177 - -1.3 2,799,182 - -0.2 2,799,182 - -0.3 2,799,205 - -1.7 2,799,453 + +0.0 2,799,456 - +0.2 2,799,461 - -0.7
Or see this region's nucleotide sequence