Experiment: MoLS4 with L-Methionine (1mM) as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1715 and DVU1716 are separated by 41 nucleotides DVU1716 and DVU1717 are separated by 11 nucleotides DVU1717 and DVU1718 are separated by 56 nucleotides DVU1718 and DVU1719 are separated by 4 nucleotides DVU1719 and DVU1720 overlap by 4 nucleotides
DVU1715: DVU1715 - hypothetical protein (TIGR), at 1,791,227 to 1,791,814
DVU1715
DVU1716: DVU1716 - hypothetical protein (TIGR), at 1,791,856 to 1,792,200
DVU1716
DVU1717: DVU1717 - hypothetical protein (TIGR), at 1,792,212 to 1,792,613
DVU1717
DVU1718: DVU1718 - hypothetical protein (TIGR), at 1,792,670 to 1,793,602
DVU1718
DVU1719: DVU1719 - conserved domain protein (TIGR), at 1,793,607 to 1,794,446
DVU1719
DVU1720: DVU1720 - hypothetical protein (TIGR), at 1,794,443 to 1,794,775
DVU1720
Position (kb)
1792
1793
1794 Strain fitness (log2 ratio)
-1
0
1 at 1791.711 kb on + strand, within DVU1715 at 1791.756 kb on + strand at 1791.847 kb on - strand at 1791.847 kb on - strand at 1791.905 kb on - strand, within DVU1716 at 1791.919 kb on + strand, within DVU1716 at 1791.927 kb on - strand, within DVU1716 at 1791.927 kb on - strand, within DVU1716 at 1791.942 kb on - strand, within DVU1716 at 1792.009 kb on + strand, within DVU1716 at 1792.088 kb on + strand, within DVU1716 at 1792.098 kb on + strand, within DVU1716 at 1792.098 kb on + strand, within DVU1716 at 1792.098 kb on + strand, within DVU1716 at 1792.098 kb on + strand, within DVU1716 at 1792.098 kb on + strand, within DVU1716 at 1792.098 kb on + strand, within DVU1716 at 1792.106 kb on - strand, within DVU1716 at 1792.135 kb on - strand, within DVU1716 at 1792.147 kb on - strand, within DVU1716 at 1792.157 kb on - strand, within DVU1716 at 1792.172 kb on + strand at 1792.205 kb on + strand at 1792.246 kb on - strand at 1792.271 kb on - strand, within DVU1717 at 1792.309 kb on + strand, within DVU1717 at 1792.359 kb on + strand, within DVU1717 at 1792.387 kb on - strand, within DVU1717 at 1792.414 kb on + strand, within DVU1717 at 1792.417 kb on - strand, within DVU1717 at 1792.434 kb on + strand, within DVU1717 at 1792.451 kb on + strand, within DVU1717 at 1792.487 kb on + strand, within DVU1717 at 1792.553 kb on + strand, within DVU1717 at 1792.568 kb on - strand, within DVU1717 at 1792.627 kb on - strand at 1792.721 kb on + strand at 1792.764 kb on - strand, within DVU1718 at 1792.803 kb on - strand, within DVU1718 at 1792.809 kb on + strand, within DVU1718 at 1792.809 kb on + strand, within DVU1718 at 1792.809 kb on + strand, within DVU1718 at 1792.817 kb on - strand, within DVU1718 at 1792.817 kb on - strand, within DVU1718 at 1792.869 kb on + strand, within DVU1718 at 1792.871 kb on - strand, within DVU1718 at 1792.962 kb on + strand, within DVU1718 at 1792.962 kb on + strand, within DVU1718 at 1793.098 kb on + strand, within DVU1718 at 1793.098 kb on + strand, within DVU1718 at 1793.115 kb on - strand, within DVU1718 at 1793.130 kb on - strand, within DVU1718 at 1793.199 kb on + strand, within DVU1718 at 1793.249 kb on - strand, within DVU1718 at 1793.303 kb on + strand, within DVU1718 at 1793.332 kb on - strand, within DVU1718 at 1793.346 kb on - strand, within DVU1718 at 1793.379 kb on + strand, within DVU1718 at 1793.429 kb on - strand, within DVU1718 at 1793.645 kb on + strand at 1793.653 kb on - strand at 1793.689 kb on - strand at 1793.713 kb on + strand, within DVU1719 at 1793.713 kb on + strand, within DVU1719 at 1793.742 kb on - strand, within DVU1719 at 1793.883 kb on + strand, within DVU1719 at 1793.908 kb on + strand, within DVU1719 at 1793.958 kb on - strand, within DVU1719 at 1794.006 kb on - strand, within DVU1719 at 1794.014 kb on - strand, within DVU1719 at 1794.016 kb on + strand, within DVU1719 at 1794.016 kb on + strand, within DVU1719 at 1794.018 kb on + strand, within DVU1719 at 1794.018 kb on + strand, within DVU1719 at 1794.024 kb on - strand, within DVU1719 at 1794.063 kb on - strand, within DVU1719 at 1794.086 kb on - strand, within DVU1719 at 1794.088 kb on + strand, within DVU1719 at 1794.129 kb on - strand, within DVU1719 at 1794.154 kb on - strand, within DVU1719 at 1794.157 kb on + strand, within DVU1719 at 1794.157 kb on + strand, within DVU1719 at 1794.165 kb on - strand, within DVU1719 at 1794.195 kb on - strand, within DVU1719 at 1794.290 kb on + strand, within DVU1719 at 1794.384 kb on + strand at 1794.386 kb on + strand at 1794.488 kb on + strand, within DVU1720
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Methionine (1mM) as nutrient remove 1,791,711 + DVU1715 0.82 +0.3 1,791,756 + +0.2 1,791,847 - +1.5 1,791,847 - -0.2 1,791,905 - DVU1716 0.14 -0.5 1,791,919 + DVU1716 0.18 +0.2 1,791,927 - DVU1716 0.21 -0.3 1,791,927 - DVU1716 0.21 +0.3 1,791,942 - DVU1716 0.25 -0.2 1,792,009 + DVU1716 0.44 -0.4 1,792,088 + DVU1716 0.67 -0.1 1,792,098 + DVU1716 0.70 -1.1 1,792,098 + DVU1716 0.70 -0.1 1,792,098 + DVU1716 0.70 +0.2 1,792,098 + DVU1716 0.70 +0.8 1,792,098 + DVU1716 0.70 -0.4 1,792,098 + DVU1716 0.70 -0.2 1,792,106 - DVU1716 0.72 +0.8 1,792,135 - DVU1716 0.81 -1.4 1,792,147 - DVU1716 0.84 +0.4 1,792,157 - DVU1716 0.87 -0.5 1,792,172 + -0.8 1,792,205 + +0.0 1,792,246 - -0.3 1,792,271 - DVU1717 0.15 -0.2 1,792,309 + DVU1717 0.24 +0.2 1,792,359 + DVU1717 0.37 -1.0 1,792,387 - DVU1717 0.44 -0.2 1,792,414 + DVU1717 0.50 +0.1 1,792,417 - DVU1717 0.51 -1.3 1,792,434 + DVU1717 0.55 -1.4 1,792,451 + DVU1717 0.59 +0.8 1,792,487 + DVU1717 0.68 +0.3 1,792,553 + DVU1717 0.85 -0.2 1,792,568 - DVU1717 0.89 +0.0 1,792,627 - -1.3 1,792,721 + -0.1 1,792,764 - DVU1718 0.10 +0.4 1,792,803 - DVU1718 0.14 +0.2 1,792,809 + DVU1718 0.15 +0.1 1,792,809 + DVU1718 0.15 -0.3 1,792,809 + DVU1718 0.15 +0.3 1,792,817 - DVU1718 0.16 +0.7 1,792,817 - DVU1718 0.16 -0.2 1,792,869 + DVU1718 0.21 +0.2 1,792,871 - DVU1718 0.22 -0.2 1,792,962 + DVU1718 0.31 +1.1 1,792,962 + DVU1718 0.31 -1.3 1,793,098 + DVU1718 0.46 +0.4 1,793,098 + DVU1718 0.46 -1.2 1,793,115 - DVU1718 0.48 +0.1 1,793,130 - DVU1718 0.49 -1.3 1,793,199 + DVU1718 0.57 +0.4 1,793,249 - DVU1718 0.62 -0.9 1,793,303 + DVU1718 0.68 +0.1 1,793,332 - DVU1718 0.71 +0.4 1,793,346 - DVU1718 0.72 +1.3 1,793,379 + DVU1718 0.76 +0.0 1,793,429 - DVU1718 0.81 +0.5 1,793,645 + -0.0 1,793,653 - -0.0 1,793,689 - -0.2 1,793,713 + DVU1719 0.13 -0.4 1,793,713 + DVU1719 0.13 +0.2 1,793,742 - DVU1719 0.16 +0.0 1,793,883 + DVU1719 0.33 -0.3 1,793,908 + DVU1719 0.36 -0.3 1,793,958 - DVU1719 0.42 -0.9 1,794,006 - DVU1719 0.47 -1.1 1,794,014 - DVU1719 0.48 -0.1 1,794,016 + DVU1719 0.49 -0.3 1,794,016 + DVU1719 0.49 -0.6 1,794,018 + DVU1719 0.49 -0.5 1,794,018 + DVU1719 0.49 -0.4 1,794,024 - DVU1719 0.50 -1.0 1,794,063 - DVU1719 0.54 -0.4 1,794,086 - DVU1719 0.57 -0.9 1,794,088 + DVU1719 0.57 -1.1 1,794,129 - DVU1719 0.62 -0.7 1,794,154 - DVU1719 0.65 +1.0 1,794,157 + DVU1719 0.65 +0.0 1,794,157 + DVU1719 0.65 -0.0 1,794,165 - DVU1719 0.66 +0.2 1,794,195 - DVU1719 0.70 +0.1 1,794,290 + DVU1719 0.81 -0.1 1,794,384 + +0.1 1,794,386 + -0.3 1,794,488 + DVU1720 0.14 -1.2
Or see this region's nucleotide sequence