Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3910

Experiment: 7H9 with Clofazimine 0.45 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.45 ug/mL
4,398,331	+		Rv3910	0.49	-0.5
4,398,752	+		Rv3910	0.61	-0.5
4,398,752	+		Rv3910	0.61	-1.0
4,399,819	+				-1.7
4,399,820	-				+0.8
4,399,843	-				-0.5
4,400,082	+				-1.6
4,400,082	+				-0.4
4,400,185	+				+1.2
4,400,204	+				-0.1
4,400,325	+		Rv3911	0.21	-0.1
4,400,326	-		Rv3911	0.21	+0.0
4,400,326	-		Rv3911	0.21	+1.5
4,400,326	-		Rv3911	0.21	+0.1
4,400,520	+		Rv3911	0.50	-0.5
4,400,520	+		Rv3911	0.50	-0.4
4,400,798	-				-1.0
4,400,798	-				-0.2
4,401,135	+		Rv3912	0.35	-0.6
4,401,136	-		Rv3912	0.35	-0.2
4,401,136	-		Rv3912	0.35	+0.3