Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3303c

Experiment: 7H9 with Clofazimine 0.45 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.45 ug/mL
3,689,493	+				-0.5
3,689,494	-				+0.2
3,690,047	-		Rv3303c	0.40	-0.4
3,690,047	-		Rv3303c	0.40	-2.4
3,690,413	-		Rv3303c	0.65	-0.2
3,690,413	-		Rv3303c	0.65	-1.8
3,690,946	-				+0.5
3,690,950	+				+0.3
3,690,951	-				-1.2
3,690,951	-				-0.6
3,690,951	-				-0.7
3,690,951	-				-0.2
3,691,107	-				-0.8
3,691,160	-				-0.8
3,691,334	-		Rv3304	0.40	-1.4
3,691,468	+		Rv3304	0.68	-0.7
3,691,515	-		Rv3304	0.78	-1.8
3,691,566	-		Rv3304	0.89	-0.2
3,691,566	-		Rv3304	0.89	+0.3
3,691,612	-				+1.6
3,691,618	+				+0.4
3,691,618	+				-0.4
3,691,641	-				-0.4
3,691,860	+		Rv3305c	0.19	+0.5