Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2772c

Experiment: 7H9 with Clofazimine 0.45 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.45 ug/mL
3,080,243	+		Rv2770c	0.81	-0.7
3,080,243	+		Rv2770c	0.81	-0.1
3,080,243	+		Rv2770c	0.81	+0.1
3,080,244	-		Rv2770c	0.81	-1.4
3,080,244	-		Rv2770c	0.81	-0.3
3,080,244	-		Rv2770c	0.81	+0.5
3,080,244	-		Rv2770c	0.81	+0.2
3,080,356	+				+0.3
3,080,356	+				-0.3
3,080,357	-				+0.9
3,080,357	-				-0.6
3,080,357	-				-0.4
3,080,411	+				-0.4
3,080,412	-				-0.6
3,080,412	-				-0.1
3,080,441	-				-0.8
3,080,518	+				-3.2
3,080,590	+				+0.3
3,080,591	-				-1.0
3,080,665	+		Rv2771c	0.19	-0.6
3,080,666	-		Rv2771c	0.19	-0.1
3,080,756	+		Rv2771c	0.39	-0.4
3,080,798	+		Rv2771c	0.48	-0.2
3,080,799	-		Rv2771c	0.48	-0.6
3,080,801	+		Rv2771c	0.49	-0.6
3,080,802	-		Rv2771c	0.49	+0.5
3,080,802	-		Rv2771c	0.49	+0.6
3,081,097	+				-1.3
3,081,149	+				+1.5
3,081,149	+				-1.0
3,081,388	-		Rv2772c	0.57	+0.7
3,081,528	+		Rv2772c	0.86	+0.7
3,081,573	+				+0.7
3,081,573	+				+0.3
3,081,574	-				-1.2
3,082,454	-		Rv2774c	0.25	-0.5
3,082,454	-		Rv2774c	0.25	+1.2