Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1507c

Experiment: 7H9 with Clofazimine 0.45 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.45 ug/mL
1,696,371	-		Rv1506c	0.85	-0.2
1,696,371	-		Rv1506c	0.85	-0.1
1,696,529	-				-0.1
1,696,626	+				-0.2
1,696,626	+				-0.2
1,696,627	-				-0.2
1,696,718	+				+0.9
1,696,719	-				+0.0
1,696,741	-				+0.6
1,696,829	-		Rv1507c	0.15	-1.0
1,697,259	-		Rv1507c	0.76	-0.3
1,697,607	+		Rv1507A	0.50	-0.0
1,697,608	-		Rv1507A	0.50	-0.4
1,697,742	-		Rv1507A	0.77	-0.5
1,697,742	-		Rv1507A	0.77	-1.2
1,697,818	-				-0.3
1,697,850	-				+0.5
1,698,008	-				+0.0
1,698,008	-				-0.7
1,698,030	+				-0.4
1,698,096	+				-0.2
1,698,105	+				+0.5
1,698,106	-				-0.2
1,698,208	+				-0.7
1,698,267	-				-0.3
1,698,267	-				-0.5
1,698,267	-				-0.3
1,698,269	+				+0.3
1,698,270	-				+0.2
1,698,338	+		Rv1508c	0.14	+0.9
1,698,364	-		Rv1508c	0.15	-0.5
1,698,376	-		Rv1508c	0.16	-0.0