Experiment: 7H9 with Clofazimine 0.45 ug/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Rv0891c and Rv0892 are separated by 397 nucleotides Rv0892 and Rv0893c overlap by 23 nucleotides
Rv0891c: Rv0891c - Possible transcriptional regulatory protein, at 992,598 to 993,455
Rv0891c
Rv0892: Rv0892 - Probable monooxygenase, at 993,853 to 995,340
Rv0892
Rv0893c: Rv0893c - Possible S-adenosylmethionine-dependent methyltransferase, at 995,318 to 996,295
Rv0893c
Position (kb) 993
994
995
996 Strain fitness (log2 ratio) -2
-1
0
1 at 992.916 kb on + strand, within Rv0891c at 992.917 kb on - strand, within Rv0891c at 992.937 kb on + strand, within Rv0891c at 992.938 kb on - strand, within Rv0891c at 992.938 kb on - strand, within Rv0891c at 992.939 kb on + strand, within Rv0891c at 992.940 kb on - strand, within Rv0891c at 992.940 kb on - strand, within Rv0891c at 992.943 kb on + strand, within Rv0891c at 992.943 kb on + strand, within Rv0891c at 992.943 kb on + strand, within Rv0891c at 993.029 kb on + strand, within Rv0891c at 993.029 kb on + strand, within Rv0891c at 993.030 kb on - strand, within Rv0891c at 993.216 kb on + strand, within Rv0891c at 993.341 kb on + strand, within Rv0891c at 993.342 kb on - strand, within Rv0891c at 993.434 kb on + strand at 993.477 kb on - strand at 993.526 kb on + strand at 993.527 kb on - strand at 993.748 kb on + strand at 993.751 kb on - strand at 994.263 kb on - strand, within Rv0892 at 994.479 kb on + strand, within Rv0892 at 994.547 kb on - strand, within Rv0892 at 994.548 kb on + strand, within Rv0892 at 994.555 kb on + strand, within Rv0892 at 994.558 kb on - strand, within Rv0892 at 995.198 kb on - strand at 995.271 kb on - strand at 995.319 kb on + strand at 995.345 kb on + strand at 995.388 kb on - strand at 995.420 kb on - strand, within Rv0893c at 995.867 kb on + strand, within Rv0893c at 996.105 kb on + strand, within Rv0893c
Per-strain Table
Position Strand Gene LocusTag Fraction 7H9 with Clofazimine 0.45 ug/mL remove 992,916 + Rv0891c 0.37 -0.2 992,917 - Rv0891c 0.37 +0.1 992,937 + Rv0891c 0.40 -1.2 992,938 - Rv0891c 0.40 -1.1 992,938 - Rv0891c 0.40 -0.1 992,939 + Rv0891c 0.40 -0.3 992,940 - Rv0891c 0.40 -2.5 992,940 - Rv0891c 0.40 -0.6 992,943 + Rv0891c 0.40 -0.2 992,943 + Rv0891c 0.40 +0.4 992,943 + Rv0891c 0.40 -0.2 993,029 + Rv0891c 0.50 +0.4 993,029 + Rv0891c 0.50 +0.6 993,030 - Rv0891c 0.50 -0.2 993,216 + Rv0891c 0.72 -0.5 993,341 + Rv0891c 0.87 -0.2 993,342 - Rv0891c 0.87 -0.4 993,434 + -0.9 993,477 - -1.5 993,526 + -0.2 993,527 - +0.2 993,748 + +0.1 993,751 - +0.4 994,263 - Rv0892 0.28 -1.3 994,479 + Rv0892 0.42 -1.7 994,547 - Rv0892 0.47 +0.8 994,548 + Rv0892 0.47 +0.3 994,555 + Rv0892 0.47 +0.8 994,558 - Rv0892 0.47 -0.7 995,198 - -0.3 995,271 - +0.1 995,319 + -0.3 995,345 + +1.3 995,388 - -1.3 995,420 - Rv0893c 0.10 +0.7 995,867 + Rv0893c 0.56 +1.1 996,105 + Rv0893c 0.80 +0.3
Or see this region's nucleotide sequence