Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0817c

Experiment: 7H9 with Clofazimine 0.45 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.45 ug/mL
909,337	+				+0.2
909,337	+				-0.5
909,385	+				-0.7
909,385	+				+0.6
909,386	-				+0.7
909,386	-				+0.3
909,440	+				-0.4
909,454	+				+0.9
909,455	-				-0.1
909,464	+				+0.7
909,464	+				-0.4
909,464	+				+0.3
909,500	+				-0.4
909,501	-				-1.2
909,605	+				-1.3
909,605	+				-0.2
909,825	-		Rv0816c	0.51	-0.1
910,003	+				-0.5
910,003	+				-0.1
910,004	-				-0.1
910,004	-				+1.9
910,895	+				+0.1
910,901	+				-0.0
910,982	+				-1.5
910,982	+				+1.6
910,982	+				+0.0
910,982	+				+0.5
910,983	-				+0.3
910,983	-				-0.9
910,983	-				-1.6
910,985	+				+0.5
910,985	+				-0.3
910,985	+				-0.4
910,985	+				+0.9
910,985	+				+0.5
910,985	+				+0.9
910,986	-				-0.5
911,189	+		Rv0818	0.28	-0.1
911,386	+		Rv0818	0.54	-0.1
911,387	-		Rv0818	0.54	-2.7
911,425	+		Rv0818	0.59	-0.2
911,425	+		Rv0818	0.59	+0.2
911,425	+		Rv0818	0.59	+0.3
911,426	-		Rv0818	0.59	-1.8
911,426	-		Rv0818	0.59	-1.4
911,426	-		Rv0818	0.59	-2.1
911,449	+		Rv0818	0.62	+1.9
911,450	-		Rv0818	0.62	-1.6
911,512	+		Rv0818	0.70	-0.9
911,513	-		Rv0818	0.70	-1.1
911,620	+		Rv0818	0.84	-0.8
911,620	+		Rv0818	0.84	-0.4
911,700	+				-0.2
911,700	+				-0.3
911,700	+				-0.2
911,700	+				-0.2