Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1929c

Experiment: 7H9 with Clofazimine 0.45 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.45 ug/mL
2,180,296	+		Rv1927	0.80	-0.5
2,180,296	+		Rv1927	0.80	+0.0
2,180,464	-				-0.9
2,180,497	+				-0.6
2,180,500	-				-0.1
2,180,524	-				-0.5
2,180,599	-		Rv1928c	0.19	-1.2
2,180,608	-		Rv1928c	0.21	-1.5
2,181,127	-		Rv1928c	0.88	-1.1
2,181,127	-		Rv1928c	0.88	+0.1
2,181,354	-		Rv1929c	0.14	-0.6
2,181,685	-		Rv1929c	0.66	-2.2
2,181,685	-		Rv1929c	0.66	+1.7
2,181,685	-		Rv1929c	0.66	-0.1
2,181,705	+		Rv1929c	0.69	-0.8
2,181,828	+		Rv1929c	0.88	-0.6
2,181,828	+		Rv1929c	0.88	+0.3
2,181,829	-		Rv1929c	0.88	+0.1
2,182,382	-		Rv1930c	0.88	-2.5
2,182,418	-				-0.4
2,182,494	-				+2.7
2,182,838	+		Rv1931c	0.48	-0.1
2,182,838	+		Rv1931c	0.48	-0.3