Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3884c

Experiment: 7H9 with Clofazimine 0.072 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.072 ug/mL
4,364,029	+		Rv3883c	0.46	-0.5
4,364,144	+		Rv3883c	0.54	-0.1
4,364,145	-		Rv3883c	0.54	+0.0
4,364,305	+		Rv3883c	0.66	+0.5
4,364,305	+		Rv3883c	0.66	-0.3
4,364,552	+		Rv3883c	0.85	+0.3
4,364,552	+		Rv3883c	0.85	-0.8
4,364,748	+				-0.1
4,364,811	+				-0.1
4,364,812	-				+0.3
4,364,812	-				-0.1
4,364,921	+				-0.1
4,365,197	+		Rv3884c	0.12	+0.0
4,365,198	-		Rv3884c	0.12	+1.4
4,365,208	+		Rv3884c	0.12	-0.3
4,365,208	+		Rv3884c	0.12	-0.7
4,365,209	-		Rv3884c	0.12	-1.1
4,365,209	-		Rv3884c	0.12	-0.1
4,365,212	+		Rv3884c	0.13	-0.3
4,365,213	-		Rv3884c	0.13	-0.2
4,365,213	-		Rv3884c	0.13	-0.8
4,365,282	-		Rv3884c	0.16	-0.7
4,365,282	-		Rv3884c	0.16	-0.5
4,365,286	+		Rv3884c	0.17	-1.5
4,365,704	+		Rv3884c	0.39	+0.1
4,365,772	-		Rv3884c	0.43	-0.6
4,366,120	+		Rv3884c	0.61	-0.0
4,366,120	+		Rv3884c	0.61	-2.0
4,366,388	-		Rv3884c	0.76	+0.2
4,366,388	-		Rv3884c	0.76	-0.5
4,366,388	-		Rv3884c	0.76	-0.6
4,366,388	-		Rv3884c	0.76	+0.0
4,366,388	-		Rv3884c	0.76	+0.1
4,366,424	-		Rv3884c	0.78	-1.7
4,366,424	-		Rv3884c	0.78	-0.1
4,366,424	-		Rv3884c	0.78	-0.4
4,366,443	+		Rv3884c	0.79	-0.5
4,366,444	-		Rv3884c	0.79	-0.2
4,366,806	+				-0.7
4,367,473	-		Rv3885c	0.35	-0.5
4,367,740	+		Rv3885c	0.52	-0.8