Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3298c

Experiment: 7H9 with Clofazimine 0.072 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.072 ug/mL
3,681,633	+		Rv3297	0.41	-0.8
3,681,687	+		Rv3297	0.48	+1.5
3,681,687	+		Rv3297	0.48	-0.7
3,681,688	-		Rv3297	0.48	+0.1
3,681,815	+		Rv3297	0.64	+0.8
3,681,816	-		Rv3297	0.65	+0.6
3,681,816	-		Rv3297	0.65	-0.2
3,682,062	-				-0.9
3,682,111	+				+1.7
3,682,202	-		Rv3298c	0.10	+0.4
3,682,223	+		Rv3298c	0.12	-0.6
3,682,223	+		Rv3298c	0.12	+0.2
3,682,223	+		Rv3298c	0.12	+1.3
3,682,223	+		Rv3298c	0.12	-0.5
3,682,223	+		Rv3298c	0.12	+0.1
3,682,223	+		Rv3298c	0.12	-0.8
3,682,224	-		Rv3298c	0.12	-1.1
3,682,224	-		Rv3298c	0.12	+0.5
3,682,224	-		Rv3298c	0.12	-0.0
3,682,502	+		Rv3298c	0.43	+1.7
3,682,503	-		Rv3298c	0.43	+0.7
3,682,760	-		Rv3298c	0.71	+0.5
3,682,997	+				+1.0
3,682,998	-				+1.1
3,683,123	+				-0.2
3,683,123	+				+1.7
3,683,124	-				-1.1
3,683,241	+				+1.1
3,683,248	+				+0.0
3,683,248	+				+1.0
3,683,249	-				-0.3
3,683,437	-		Rv3299c	0.13	-0.1
3,683,576	-		Rv3299c	0.18	-1.7
3,683,802	+		Rv3299c	0.26	+1.0
3,683,802	+		Rv3299c	0.26	-0.1
3,683,803	-		Rv3299c	0.26	+0.5
3,683,832	+		Rv3299c	0.27	-0.9
3,683,922	+		Rv3299c	0.30	-0.2
3,683,922	+		Rv3299c	0.30	-0.5
3,683,952	+		Rv3299c	0.31	-0.4