Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2318

Experiment: 7H9 with Clofazimine 0.072 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.072 ug/mL
2,589,676	-				-0.0
2,589,709	-				+0.2
2,590,025	-		Rv2317	0.40	+1.5
2,590,640	-				-1.0
2,590,836	+		Rv2318	0.24	+0.1
2,591,187	+		Rv2318	0.51	+1.7
2,591,391	+		Rv2318	0.66	+0.7
2,591,392	-		Rv2318	0.66	-0.5
2,591,839	-				-0.2
2,591,918	-				-1.0
2,592,288	-		Rv2319c	0.50	-0.1
2,592,479	+		Rv2319c	0.72	-0.8
2,592,480	-		Rv2319c	0.72	+2.1
2,592,480	-		Rv2319c	0.72	-0.2
2,592,671	-				+0.1
2,592,676	+				+0.7
2,592,676	+				-0.6
2,592,677	-				-0.2
2,592,707	+				-0.3
2,592,821	-				+0.9