Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2136c

Experiment: 7H9 with Clofazimine 0.072 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.072 ug/mL
2,395,151	+		Rv2134c	0.85	+0.1
2,395,151	+		Rv2134c	0.85	-1.7
2,395,151	+		Rv2134c	0.85	+1.0
2,395,152	-		Rv2134c	0.85	+1.8
2,395,155	+		Rv2134c	0.86	+0.4
2,395,156	-		Rv2134c	0.86	+1.2
2,395,156	-		Rv2134c	0.86	-0.2
2,395,217	+				-0.2
2,395,218	-				-1.6
2,395,218	-				-0.4
2,395,218	-				+0.2
2,395,302	+				+0.3
2,395,994	+				+0.4
2,396,087	+				-0.1
2,396,087	+				+0.1
2,396,088	-				-1.2
2,396,574	-		Rv2136c	0.68	-1.2
2,396,574	-		Rv2136c	0.68	-1.1
2,396,653	-		Rv2136c	0.78	-1.9
2,396,666	+		Rv2136c	0.79	+1.2
2,396,667	-		Rv2136c	0.79	-0.6
2,396,675	-		Rv2136c	0.80	-0.1
2,396,675	-		Rv2136c	0.80	-1.1
2,396,903	+				-0.5
2,397,148	+		Rv2137c	0.59	-0.7
2,397,150	+		Rv2137c	0.60	-1.7
2,397,221	+		Rv2137c	0.77	+0.0
2,397,221	+		Rv2137c	0.77	+1.4
2,397,221	+		Rv2137c	0.77	+0.2
2,397,222	-		Rv2137c	0.77	-0.6
2,397,334	+				-0.0