Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv0017c

Experiment: 7H9 with Clofazimine 0.072 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.072 ug/mL
19,454	-		Rv0016c	0.47	-2.2
19,694	-		Rv0016c	0.63	-0.9
19,761	-		Rv0016c	0.68	-0.0
19,830	-		Rv0016c	0.73	-1.7
19,936	-		Rv0016c	0.80	-0.8
19,985	-		Rv0016c	0.83	+0.9
20,279	-				+2.0
20,346	-				-1.7
20,376	+		Rv0017c	0.10	-1.4
20,498	-		Rv0017c	0.19	+1.7
20,548	-		Rv0017c	0.22	-1.1
20,548	-		Rv0017c	0.22	-1.2
20,883	+		Rv0017c	0.46	+0.2
20,884	-		Rv0017c	0.46	-1.1
21,415	-		Rv0017c	0.84	-1.8
22,118	+		Rv0018c	0.31	-1.1
22,119	-		Rv0018c	0.31	-2.0
22,187	+		Rv0018c	0.36	-0.3
22,455	-		Rv0018c	0.53	-2.0