Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv3231c

Experiment: 7H9 with Clofazimine 0.072 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.072 ug/mL
3,607,659	-		Rv3230c	0.48	+3.9
3,607,714	+		Rv3230c	0.53	+0.1
3,607,714	+		Rv3230c	0.53	+1.9
3,607,971	+		Rv3230c	0.75	+0.3
3,607,972	-		Rv3230c	0.75	-0.6
3,607,972	-		Rv3230c	0.75	-0.6
3,608,113	-		Rv3230c	0.88	+0.2
3,608,113	-		Rv3230c	0.88	+2.9
3,608,255	-				-0.7
3,608,255	-				-1.4
3,608,276	-				+0.0
3,608,320	+				+0.2
3,608,324	+				-1.0
3,608,531	-		Rv3231c	0.33	+0.2
3,608,531	-		Rv3231c	0.33	+0.1
3,608,602	+		Rv3231c	0.47	+0.2
3,608,603	-		Rv3231c	0.47	+0.4
3,608,603	-		Rv3231c	0.47	+0.1
3,608,755	+		Rv3231c	0.77	+0.1
3,608,756	-		Rv3231c	0.77	+0.5
3,608,860	+				-0.2
3,608,861	-				+1.9
3,608,895	+				+0.3
3,608,895	+				+0.7
3,608,896	-				-0.3
3,608,896	-				-0.2
3,608,896	-				-1.2
3,608,896	-				+0.0
3,608,907	+				-0.5
3,608,908	-				-0.2
3,608,908	-				+1.4
3,608,937	+				+0.1
3,608,937	+				-0.3
3,608,997	+		Rv3232c	0.14	-0.2
3,608,998	-		Rv3232c	0.14	-0.3
3,609,069	+		Rv3232c	0.22	-0.2
3,609,069	+		Rv3232c	0.22	-0.1
3,609,070	-		Rv3232c	0.23	+0.5
3,609,070	-		Rv3232c	0.23	-0.7
3,609,127	-		Rv3232c	0.29	-0.8
3,609,318	+		Rv3232c	0.50	-0.1
3,609,318	+		Rv3232c	0.50	-0.6
3,609,319	-		Rv3232c	0.51	+0.2
3,609,319	-		Rv3232c	0.51	-1.2
3,609,331	+		Rv3232c	0.52	-0.2
3,609,370	-		Rv3232c	0.56	+1.5
3,609,392	+		Rv3232c	0.59	-0.8
3,609,392	+		Rv3232c	0.59	+2.2
3,609,393	-		Rv3232c	0.59	+0.1
3,609,393	-		Rv3232c	0.59	+1.9
3,609,421	+		Rv3232c	0.62	+0.4
3,609,421	+		Rv3232c	0.62	+0.0
3,609,422	-		Rv3232c	0.62	+0.1
3,609,423	+		Rv3232c	0.62	-0.6
3,609,423	+		Rv3232c	0.62	+0.7
3,609,423	+		Rv3232c	0.62	+0.6
3,609,423	+		Rv3232c	0.62	+0.2
3,609,424	-		Rv3232c	0.62	-0.9
3,609,432	+		Rv3232c	0.63	-0.6
3,609,432	+		Rv3232c	0.63	+0.9
3,609,432	+		Rv3232c	0.63	-0.0
3,609,433	-		Rv3232c	0.63	+0.3
3,609,433	-		Rv3232c	0.63	+0.1
3,609,435	+		Rv3232c	0.64	+1.1
3,609,504	+		Rv3232c	0.71	+0.2
3,609,536	-		Rv3232c	0.75	-0.0
3,609,645	+		Rv3232c	0.87	-0.3
3,609,749	+				-0.4
3,609,749	+				-0.2
3,609,750	-				-0.3
3,609,752	-				+0.4
3,609,783	-				+0.4