Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv2584c

Experiment: 7H9 with Clofazimine 0.072 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.072 ug/mL
2,909,295	-		Rv2583c	0.62	-0.8
2,909,295	-		Rv2583c	0.62	-1.5
2,909,391	-		Rv2583c	0.66	-0.2
2,909,442	-		Rv2583c	0.68	+0.4
2,909,780	+		Rv2583c	0.82	-1.1
2,909,885	+		Rv2583c	0.87	-1.0
2,909,886	-		Rv2583c	0.87	-0.6
2,909,975	+				-2.8
2,909,975	+				-0.3
2,909,976	-				-0.1
2,910,458	+		Rv2584c	0.34	-0.7
2,910,467	+		Rv2584c	0.35	+0.3
2,910,471	-		Rv2584c	0.36	-0.4
2,910,748	+		Rv2584c	0.77	-0.4
2,910,749	-		Rv2584c	0.77	+0.1
2,910,749	-		Rv2584c	0.77	-0.6
2,910,749	-		Rv2584c	0.77	-0.7
2,910,749	-		Rv2584c	0.77	-0.2
2,910,835	+				-0.3
2,910,835	+				+0.2
2,910,870	-				+0.6
2,910,885	+				-0.3
2,910,885	+				-0.3
2,910,885	+				+1.2
2,910,885	+				-0.5
2,910,936	+				-0.1
2,910,936	+				-0.2
2,910,946	+				+0.7
2,910,946	+				-0.1
2,910,946	+				-0.4
2,910,947	-				-1.3
2,911,114	-				+0.2
2,911,247	+		Rv2585c	0.15	-0.2
2,911,343	+		Rv2585c	0.20	+0.1
2,911,344	-		Rv2585c	0.20	+2.0
2,911,480	-		Rv2585c	0.28	+0.4
2,911,661	+		Rv2585c	0.39	-0.4
2,911,765	-		Rv2585c	0.45	-1.4