Strain Fitness in Mycobacterium tuberculosis H37Rv around Rv1969

Experiment: 7H9 with Clofazimine 0.072 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	7H9 with Clofazimine 0.072 ug/mL
2,212,019	+		Rv1968	0.32	+0.0
2,212,124	-		Rv1968	0.40	+0.2
2,212,544	+		Rv1968	0.74	-0.1
2,212,544	+		Rv1968	0.74	-0.2
2,212,544	+		Rv1968	0.74	-0.7
2,212,545	-		Rv1968	0.75	+0.1
2,212,545	-		Rv1968	0.75	+0.6
2,213,102	-		Rv1969	0.19	-0.7
2,213,102	-		Rv1969	0.19	-2.1
2,213,216	+		Rv1969	0.28	-0.1
2,213,217	-		Rv1969	0.28	+2.0
2,213,979	+		Rv1969	0.88	-0.2
2,214,163	+				-1.0
2,215,048	-		Rv1970	0.82	+0.2